Strain identifier

BacDive ID: 138431

Type strain: No

Species: Salmonella enterica

Strain Designation: 2-6390609

Strain history: CIP <- 2000, A. Friis-Moeller, Copenhagen Univ. Hvidovre Hosp., Copenhagen, Denmark: strain 2-6390609

NCBI tax ID(s): 28901 (species)

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General

@ref: 39719

BacDive-ID: 138431

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Salmonella enterica 2-6390609 is a facultative anaerobe, mesophilic, Gram-negative bacterium of the family Enterobacteriaceae.

NCBI tax id

  • NCBI tax id: 28901
  • Matching level: species

strain history

  • @ref: 39719
  • history: CIP <- 2000, A. Friis-Moeller, Copenhagen Univ. Hvidovre Hosp., Copenhagen, Denmark: strain 2-6390609

doi: 10.13145/bacdive138431.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Salmonella
  • species: Salmonella enterica
  • full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

  • synonyms

    @refsynonym
    20215Bacillus typhi
    20215Bacillus typhimurium
    20215Bacillus enteritidis
    20215Bacillus choleraesuis
    20215Salmonella typhi
    20215Salmonella choleraesuis
    20215Salmonella paratyphi
    20215Salmonella typhimurium
    20215Salmonella enteritidis

@ref: 39719

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Salmonella

species: Salmonella enterica

strain designation: 2-6390609

type strain: no

Morphology

cell morphology

  • @ref: 39719
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39719MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
39719CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72
39719CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
39719positivegrowth30mesophilic
39719positivegrowth30-41
39719nogrowth5psychrophilic
39719nogrowth10psychrophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 39719
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3971929864mannitol+fermentation
3971916947citrate-carbon source
3971917234glucose+fermentation
3971917716lactose-fermentation
3971917632nitrate+reduction
3971916301nitrite-reduction
3971915792malonate-assimilation
39719132112sodium thiosulfate+builds gas from

antibiotic resistance

  • @ref: 39719
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 39719
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3971915688acetoin-
3971917234glucose+

enzymes

@refvalueactivityec
39719oxidase-
39719beta-galactosidase-3.2.1.23
39719alcohol dehydrogenase-1.1.1.1
39719gelatinase-
39719catalase+1.11.1.6
39719lysine decarboxylase+4.1.1.18
39719ornithine decarboxylase-4.1.1.17
39719phenylalanine ammonia-lyase-4.3.1.24
39719tryptophan deaminase-
39719urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39719-+++-+----++---+----

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
39719+++++-+--++---+----+-+---------+-+--+------++-----+-+-+----++----++--------+------+---+--+++-++-+--

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
39719CopenhagenDenmarkDNKEurope
39719CopenhagenDenmarkDNKEuropeHuman, Blood1998

Safety information

risk assessment

  • @ref: 39719
  • biosafety level: 3
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39719

culture collection no.: CIP 106683

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39719Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106683Collection of Institut Pasteur (CIP 106683)
68382Automatically annotated from API zym