Strain identifier

BacDive ID: 138352

Type strain: No

Species: Acidovorax temperans

Strain history: CIP <- 2000, CCUG <- Hosp. Infect. Ctrl. Lab., PHL Göteborg, Sweden

NCBI tax ID(s): 80878 (species)

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General

@ref: 39522

BacDive-ID: 138352

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Acidovorax temperans CIP 106440 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Comamonadaceae.

NCBI tax id

  • NCBI tax id: 80878
  • Matching level: species

strain history

  • @ref: 39522
  • history: CIP <- 2000, CCUG <- Hosp. Infect. Ctrl. Lab., PHL Göteborg, Sweden

doi: 10.13145/bacdive138352.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Comamonadaceae
  • genus: Acidovorax
  • species: Acidovorax temperans
  • full scientific name: Acidovorax temperans Willems et al. 1990

@ref: 39522

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Comamonadaceae

genus: Acidovorax

species: Acidovorax temperans

type strain: no

Morphology

cell morphology

  • @ref: 39522
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

pigmentation

  • @ref: 39522
  • production: no
  • name: Pyocyanin

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39522MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
39522CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3
39522CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperature
39522positivegrowth30
39522positivegrowth25-37
39522nogrowth5
39522nogrowth10
39522nogrowth41

Physiology and metabolism

oxygen tolerance

  • @ref: 39522
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
39522NaClpositivegrowth0-6 %
39522NaClnogrowth8 %
39522NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3952216947citrate-carbon source
395224853esculin+hydrolysis
3952217632nitrate+reduction
3952216301nitrite+reduction
3952217632nitrate+respiration
6836917306maltose-assimilation
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

antibiotic resistance

  • @ref: 39522
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
3952235581indoleno

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382cystine arylamidase-3.4.11.3
68382leucine arylamidase+3.4.11.1
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
39522oxidase+
39522beta-galactosidase-3.2.1.23
39522alcohol dehydrogenase-1.1.1.1
39522gelatinase+/-
39522amylase-
39522DNase-
39522caseinase-3.4.21.50
39522catalase+1.11.1.6
39522tween esterase-
39522lecithinase-
39522lipase-
39522lysine decarboxylase-4.1.1.18
39522ornithine decarboxylase-4.1.1.17
39522protease-
39522tryptophan deaminase-
39522urease-3.5.1.5
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
45319-+++-+--------------
39522-++++++-++++-----+--

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
45319+-------+--+----++--+

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
39522++--+----++------------------------------------------------+---------------+----------+-+-+++++-+--

Isolation, sampling and environmental information

isolation

@refcountryorigin.countrycontinentsample typesampling dategeographic locationisolation date
39522SwedenSWEEurope
45319SwedenSWEEuropeHospital tap water1981Göteborg
39522SwedenSWEEuropeEnvironment, Hospital tap water1981

isolation source categories

Cat1Cat2Cat3
#Infection#Medical environment#Clinic
#Environmental#Aquatic

Safety information

risk assessment

  • @ref: 39522
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39522

culture collection no.: CIP 106440, CCUG 10556, LMG 6437

straininfo link

  • @ref: 95106
  • straininfo: 147

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39522Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106440Collection of Institut Pasteur (CIP 106440)
45319Curators of the CCUGhttps://www.ccug.se/strain?id=10556Culture Collection University of Gothenburg (CCUG) (CCUG 10556)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
95106Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID147.1