Strain identifier

BacDive ID: 138351

Type strain: No

Species: Acidovorax delafieldii

Strain history: CIP <- 2000, CCUG <- 1981, PHLS, Göteborg, Sweden

NCBI tax ID(s): 47920 (species)

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General

@ref: 39521

BacDive-ID: 138351

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Acidovorax delafieldii CIP 106438 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Comamonadaceae.

NCBI tax id

  • NCBI tax id: 47920
  • Matching level: species

strain history

  • @ref: 39521
  • history: CIP <- 2000, CCUG <- 1981, PHLS, Göteborg, Sweden

doi: 10.13145/bacdive138351.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Comamonadaceae
  • genus: Acidovorax
  • species: Acidovorax delafieldii
  • full scientific name: Acidovorax delafieldii (Davis 1970) Willems et al. 1990

  • synonyms

    • @ref: 20215
    • synonym: Pseudomonas delafieldii

@ref: 39521

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Comamonadaceae

genus: Acidovorax

species: Acidovorax delafieldii

type strain: no

Morphology

cell morphology

  • @ref: 39521
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

pigmentation

  • @ref: 39521
  • production: no
  • name: Pyocyanin

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39521MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
39521CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
39521positivegrowth25mesophilic
39521positivegrowth10-37
39521nogrowth5psychrophilic
39521nogrowth41thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 39521
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
39521NaClpositivegrowth0-2 %
39521NaClnogrowth4 %
39521NaClnogrowth6 %
39521NaClnogrowth8 %
39521NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction
3952116947citrate-carbon source
395214853esculin-hydrolysis
3952117632nitrate+reduction
3952116301nitrite-reduction
3952117632nitrate-respiration

antibiotic resistance

  • @ref: 39521
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
3952135581indoleno

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
39521oxidase+
39521beta-galactosidase-3.2.1.23
39521alcohol dehydrogenase-1.1.1.1
39521gelatinase-
39521amylase-
39521DNase-
39521caseinase+3.4.21.50
39521catalase-1.11.1.6
39521tween esterase+
39521lecithinase-
39521lipase+
39521lysine decarboxylase-4.1.1.18
39521ornithine decarboxylase-4.1.1.17
39521protease+
39521tryptophan deaminase-
39521urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
45390-+++++-+------------
39521-+++-+----++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
45390+-------++++--+-----+

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
39521+++-+--------------++-----+----+-+--+----------++-------+---+-+++-+------+-+---+-+------++++-++-+++

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typesampling dateisolation date
39521GöteborgSwedenSWEEurope
45390GöteborgSwedenSWEEuropeHuman trachea,baby1981-05-13
39521GöteborgSwedenSWEEuropeHuman, Trachea1981

isolation source categories

Cat1Cat2Cat3
#Host#Human#Child
#Host Body-Site#Oral cavity and airways#Trachea

Safety information

risk assessment

  • @ref: 39521
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39521

culture collection no.: CIP 106438, CCUG 11062, LMG 7168

straininfo link

  • @ref: 95105
  • straininfo: 128

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39521Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106438Collection of Institut Pasteur (CIP 106438)
45390Curators of the CCUGhttps://www.ccug.se/strain?id=11062Culture Collection University of Gothenburg (CCUG) (CCUG 11062)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
95105Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID128.1