Strain identifier

BacDive ID: 138350

Type strain: No

Species: Acidovorax delafieldii

Strain history: CIP <- 2000, CCUG <- 1981, PHL, Göteborg, Sweden

NCBI tax ID(s): 47920 (species)

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General

@ref: 39520

BacDive-ID: 138350

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Acidovorax delafieldii CIP 106437 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Comamonadaceae.

NCBI tax id

  • NCBI tax id: 47920
  • Matching level: species

strain history

  • @ref: 39520
  • history: CIP <- 2000, CCUG <- 1981, PHL, Göteborg, Sweden

doi: 10.13145/bacdive138350.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Comamonadaceae
  • genus: Acidovorax
  • species: Acidovorax delafieldii
  • full scientific name: Acidovorax delafieldii (Davis 1970) Willems et al. 1990

  • synonyms

    • @ref: 20215
    • synonym: Pseudomonas delafieldii

@ref: 39520

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Comamonadaceae

genus: Acidovorax

species: Acidovorax delafieldii

type strain: no

Morphology

cell morphology

  • @ref: 39520
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

pigmentation

  • @ref: 39520
  • production: no
  • name: Pyocyanin

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39520MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
39520CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
39520positivegrowth25mesophilic
39520positivegrowth25-37mesophilic
39520nogrowth5psychrophilic
39520nogrowth10psychrophilic
39520nogrowth41thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 39520
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
39520NaClpositivegrowth0-2 %
39520NaClnogrowth4 %
39520NaClnogrowth6 %
39520NaClnogrowth8 %
39520NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction
3952016947citrate-carbon source
395204853esculin-hydrolysis
3952017632nitrate+reduction
3952016301nitrite-reduction
3952017632nitrate-respiration

antibiotic resistance

  • @ref: 39520
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
3952035581indoleno

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
39520oxidase+
39520beta-galactosidase-3.2.1.23
39520alcohol dehydrogenase-1.1.1.1
39520gelatinase-
39520amylase-
39520DNase-
39520caseinase-3.4.21.50
39520catalase-1.11.1.6
39520tween esterase-
39520lecithinase-
39520lipase+
39520lysine decarboxylase-4.1.1.18
39520ornithine decarboxylase-4.1.1.17
39520protease+
39520tryptophan deaminase-
39520urease+3.5.1.5
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
45389--++-+--------------
39520-+++-+----++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
45389+-------++++--+-----+

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
39520+++-+--------------++-----+----+-+--+----------++-------+-+-+-+++-+------+-+---+-+------+++++++-+++

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typesampling dateisolation date
39520GöteborgSwedenSWEEurope
45389GöteborgSwedenSWEEuropeHuman,pus,cement-femur,76-yr-old woman1981-05-11
39520GöteborgSwedenSWEEuropeHuman, Pus1981

isolation source categories

Cat1Cat2Cat3
#Engineered#Industrial#Engineered product
#Host#Human#Female
#Host Body-Site#Limb#Leg
#Host Body Product#Fluids

Safety information

risk assessment

  • @ref: 39520
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39520

culture collection no.: CIP 106437, CCUG 11056, LMG 7166

straininfo link

  • @ref: 95104
  • straininfo: 126

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39520Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106437Collection of Institut Pasteur (CIP 106437)
45389Curators of the CCUGhttps://www.ccug.se/strain?id=11056Culture Collection University of Gothenburg (CCUG) (CCUG 11056)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
95104Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID126.1