Strain identifier

BacDive ID: 138332

Type strain: Yes

Species: Alterococcus agarolyticus

Strain Designation: ADT3

Strain history: CIP <- 1999, W.Y. Shieh, Inst. Oceanog., Taipei, Taiwan: strain ADT3

NCBI tax ID(s): 78554 (species)

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General

@ref: 39475

BacDive-ID: 138332

keywords: Bacteria, thermophilic, Gram-negative, motile, rod-shaped

description: Alterococcus agarolyticus ADT3 is a thermophilic, Gram-negative, motile bacterium of the family Opitutaceae.

NCBI tax id

  • NCBI tax id: 78554
  • Matching level: species

strain history

@refhistory
394751999, W.Y. Shieh, Inst. Oceanog., Taipei, Taiwan: strain ADT3
39475CIP <- 1999, W.Y. Shieh, Inst. Oceanog., Taipei, Taiwan: strain ADT3

doi: 10.13145/bacdive138332.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/verrucomicrobiota
  • domain: Bacteria
  • phylum: Verrucomicrobiota
  • class: Opitutia
  • order: Opitutales
  • family: Opitutaceae
  • genus: Alterococcus
  • species: Alterococcus agarolyticus
  • full scientific name: Alterococcus agarolyticus Shieh and Jean 1999

@ref: 39475

domain: Bacteria

phylum: Verrucomicrobia

class: Opitutae

order: Opitutales

family: Opitutaceae

genus: Alterococcus

species: Alterococcus agarolyticus

strain designation: ADT3

type strain: yes

Morphology

cell morphology

  • @ref: 39475
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39475MEDIUM 327 - for AlterococcusyesDistilled water make up to (1000.000 ml);Sodium chloride (20.000 g);Magnesium sulphate heptahydrate (0.500 g);Calcium chloride dihydrate (0.010 g);Agar (15.000 g);Yeast extract (2.000 g);Peptone (4.000 g);MOPSO(3-[N-Mopholino]-2-hydroxypropanesulfonic aci
39475CIP Medium 327yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=327

culture temp

@refgrowthtypetemperaturerange
39475positivegrowth45thermophilic
39475positivegrowth41-45thermophilic
39475nogrowth5psychrophilic
39475nogrowth10psychrophilic
39475nogrowth30mesophilic
39475nogrowth37mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3947516947citrate-carbon source
394754853esculin-hydrolysis
3947517632nitrate-reduction
3947516301nitrite-reduction
3947515792malonate-assimilation

metabolite production

  • @ref: 39475
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3947515688acetoin-
3947517234glucose-

enzymes

@refvalueactivityec
39475oxidase+
39475beta-galactosidase-3.2.1.23
39475alcohol dehydrogenase-1.1.1.1
39475gelatinase-
39475catalase+1.11.1.6
39475lysine decarboxylase-4.1.1.18
39475ornithine decarboxylase-4.1.1.17
39475phenylalanine ammonia-lyase-4.3.1.24
39475tryptophan deaminase-
39475urease-3.5.1.5

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
39475LutaoTaiwanTWNAsia
39475LutaoTaiwanTWNAsiaEnvironment, Coastal hot spring water1996

Safety information

risk assessment

  • @ref: 39475
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39475

culture collection no.: CIP 106113, CCRC 19135

straininfo link

  • @ref: 95088
  • straininfo: 67256

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39475Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106113Collection of Institut Pasteur (CIP 106113)
95088Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID67256.1