Strain identifier

BacDive ID: 138271

Type strain: Yes

Species: Gemella sanguinis

Strain Designation: 2045-94

Strain history: CIP <- 1999, CCUG <- M.D. Collins, IFR, Reading, UK: strain 2045-94 <- R.R. Facklam, CDC, Atlanta, USA <- Georgia State Health Dept.

NCBI tax ID(s): 84135 (species)

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General

@ref: 39396

BacDive-ID: 138271

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-positive, coccus-shaped

description: Gemella sanguinis 2045-94 is a facultative anaerobe, mesophilic, Gram-positive bacterium of the family Gemellaceae.

NCBI tax id

  • NCBI tax id: 84135
  • Matching level: species

strain history

  • @ref: 39396
  • history: CIP <- 1999, CCUG <- M.D. Collins, IFR, Reading, UK: strain 2045-94 <- R.R. Facklam, CDC, Atlanta, USA <- Georgia State Health Dept.

doi: 10.13145/bacdive138271.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Gemellaceae
  • genus: Gemella
  • species: Gemella sanguinis
  • full scientific name: Gemella sanguinis Collins et al. 1999

@ref: 39396

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Caryophanales, not assigned to family

genus: Gemella

species: Gemella sanguinis

strain designation: 2045-94

type strain: yes

Morphology

cell morphology

  • @ref: 39396
  • gram stain: positive
  • cell shape: coccus-shaped
  • motility: no

colony morphology

  • @ref: 39396
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39396MEDIUM 38 - for Streptococcus and Gemella HaemolysansyesDistilled water make up to (1000.000 ml);Horse serum (200.000 ml);Glucose (10.000 g);Brain heart infusion agar (52.000 g)
39396CIP Medium 253yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=253
39396CIP Medium 38yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=38

culture temp

@refgrowthtypetemperature
39396positivegrowth37
39396positivegrowth25-41
39396nogrowth10
39396nogrowth45

Physiology and metabolism

oxygen tolerance

  • @ref: 39396
  • oxygen tolerance: facultative anaerobe

halophily

  • @ref: 39396
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 6.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
393964853esculin-hydrolysis
39396606565hippurate-hydrolysis
3939617632nitrate-reduction
3939616301nitrite-reduction
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose+builds acid from
6837128066gentiobiose-builds acid from
6837117151xylitol-builds acid from
6837128087glycogen+builds acid from
6837128017starch+builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837117992sucrose+builds acid from
6837128053melibiose-builds acid from
6837117716lactose-builds acid from
6837117306maltose+builds acid from
683714853esculin+builds acid from
6837127613amygdalin-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837143943methyl alpha-D-mannoside+builds acid from
6837117924D-sorbitol+builds acid from
6837116899D-mannitol+builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose-builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol+builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose-builds acid from
6837130849L-arabinose+builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol-builds acid from

metabolite tests

  • @ref: 39396
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382leucine arylamidase-3.4.11.1
68382lipase (C 14)-
68382alkaline phosphatase+3.1.3.1
39396oxidase-
39396beta-galactosidase-3.2.1.23
39396alcohol dehydrogenase-1.1.1.1
39396catalase-1.11.1.6
39396gamma-glutamyltransferase-2.3.2.2
39396lysine decarboxylase-4.1.1.18
39396ornithine decarboxylase-4.1.1.17
68382valine arylamidase-
68382esterase lipase (C 8)+
68382esterase (C 4)+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39396-+++------++---+----

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
39396---+---+--+++----+++-+/--+/-++/-+/-+--++/----++--+---------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample type
39396GeorgiaUSAUSANorth America
53895Ga,AugustaUSAUSANorth AmericaHuman blood,41-yr-old male
39396GeorgiaUnited States of AmericaUSANorth AmericaHuman, Blood

isolation source categories

Cat1Cat2Cat3
#Host Body Product#Fluids#Blood
#Host#Human#Male

Safety information

risk assessment

  • @ref: 39396
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39396

culture collection no.: CIP 105929, CCUG 37820, CCM 4941

straininfo link

  • @ref: 95028
  • straininfo: 12950

literature

  • topic: Phylogeny
  • Pubmed-ID: 9738079
  • title: Description of Gemella sanguinis sp. nov., isolated from human clinical specimens.
  • authors: Collins MD, Hutson RA, Falsen E, Sjoden B, Facklam RR
  • journal: J Clin Microbiol
  • DOI: 10.1128/JCM.36.10.3090-3093.1998
  • year: 1998
  • mesh: DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Gram-Positive Bacterial Infections/diagnosis/*microbiology, Gram-Positive Cocci/*classification/genetics/isolation & purification, Humans, Molecular Sequence Data, Phenotype, *Phylogeny, RNA, Ribosomal, 16S/genetics
  • topic2: Pathogenicity

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39396Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105929Collection of Institut Pasteur (CIP 105929)
53895Curators of the CCUGhttps://www.ccug.se/strain?id=37820Culture Collection University of Gothenburg (CCUG) (CCUG 37820)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
95028Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID12950.1