Strain identifier

BacDive ID: 138217

Type strain: No

Species: Campylobacter sputorum

Strain Designation: Atome

Strain history: CIP <- 1954, J. Gallut, Campylobacter sputorum subsp. bubulus <- A. Florent: strain Atome

NCBI tax ID(s): 206 (species)

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General

@ref: 39312

BacDive-ID: 138217

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Campylobacter sputorum Atome is an obligate aerobe, mesophilic, Gram-negative bacterium that was isolated from Bull sperm.

NCBI tax id

  • NCBI tax id: 206
  • Matching level: species

strain history

  • @ref: 39312
  • history: CIP <- 1954, J. Gallut, Campylobacter sputorum subsp. bubulus <- A. Florent: strain Atome

doi: 10.13145/bacdive138217.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Campylobacteraceae
  • genus: Campylobacter
  • species: Campylobacter sputorum
  • full scientific name: Campylobacter sputorum (Prévot 1940) Véron and Chatelain 1973 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Vibrio sputorum

@ref: 39312

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Campylobacteraceae

genus: Campylobacter

species: Campylobacter sputorum

strain designation: Atome

type strain: no

Morphology

cell morphology

  • @ref: 39312
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 39312

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39312MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
39312Brucella brothyes
39312CIP Medium 262yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=262
39312CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6

culture temp

@refgrowthtypetemperaturerange
39312positivegrowth37mesophilic
39312positivegrowth25-41
39312nogrowth5psychrophilic
39312nogrowth10psychrophilic
39312nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 39312
  • oxygen tolerance: obligate aerobe

halophily

  • @ref: 39312
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 3.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3931217632nitrate+reduction
3931216301nitrite+reduction

metabolite production

  • @ref: 39312
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
39312oxidase+
39312gelatinase-
39312catalase+1.11.1.6
39312urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    45417C12:00.412
    45417C14:017.314
    45417C16:027.716
    45417C18:00.618
    45417C12:0 ALDE ?0.510.915
    45417C13:0 ISO 2OH0.413.814
    45417C13:1 at 12-130.712.931
    45417C14:0 3OH/C16:1 ISO I4.615.485
    45417C16:0 3OH3.817.52
    45417C16:1 ω7c5.815.819
    45417C18:1 ω7c /12t/9t35.917.824
    45417C18:2 ω6,9c/C18:0 ANTE1.417.724
    45417unknown 14.5030.514.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39312-+++------++---+----

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinentisolation date
45417Bull spermBelgiumBELEurope
39312Animal, Bull, sperm1954

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body Product#Urogenital tract#Semen

Safety information

risk assessment

  • @ref: 39312
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39312

culture collection no.: CIP 54.20, CCUG 11290

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39312Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2054.20Collection of Institut Pasteur (CIP 54.20)
45417Curators of the CCUGhttps://www.ccug.se/strain?id=11290Culture Collection University of Gothenburg (CCUG) (CCUG 11290)
68382Automatically annotated from API zym