Strain identifier

BacDive ID: 138200

Type strain: No

Species: Helicobacter cinaedi

Strain history: CIP <- 1997, N.L. Trivett-Moore, Westmead Hosp., Westmead, Australia: strain N/A, "Helicobacter westmeadii"

NCBI tax ID(s): 213 (species)

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General

@ref: 39270

BacDive-ID: 138200

keywords: Bacteria, microaerophile, mesophilic, Gram-negative, motile, rod-shaped

description: Helicobacter cinaedi CIP 105344 is a microaerophile, mesophilic, Gram-negative bacterium of the family Helicobacteraceae.

NCBI tax id

  • NCBI tax id: 213
  • Matching level: species

strain history

  • @ref: 39270
  • history: CIP <- 1997, N.L. Trivett-Moore, Westmead Hosp., Westmead, Australia: strain N/A, "Helicobacter westmeadii"

doi: 10.13145/bacdive138200.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Helicobacteraceae
  • genus: Helicobacter
  • species: Helicobacter cinaedi
  • full scientific name: Helicobacter cinaedi (Totten et al. 1988) Vandamme et al. 1991

  • synonyms

    • @ref: 20215
    • synonym: Campylobacter cinaedi

@ref: 39270

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Helicobacteraceae

genus: Helicobacter

species: Helicobacter cinaedi

type strain: no

Morphology

cell morphology

  • @ref: 39270
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 39270

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39270MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
39270Brucella brothyes
39270CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6

culture temp

@refgrowthtypetemperature
39270positivegrowth37
39270positivegrowth30-37
39270nogrowth5
39270nogrowth10
39270nogrowth25
39270nogrowth41
39270nogrowth45

Physiology and metabolism

oxygen tolerance

  • @ref: 39270
  • oxygen tolerance: microaerophile

halophily

  • @ref: 39270
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 3.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
39270606565hippurate-hydrolysis
3927017632nitrate-reduction
3927016301nitrite-reduction

metabolite production

  • @ref: 39270
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382beta-glucosidase-3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
39270oxidase+
39270gelatinase-
39270DNase-
39270catalase+1.11.1.6
39270gamma-glutamyltransferase-2.3.2.2
39270urease-3.5.1.5
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382lipase (C 14)-

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39270-+++-+----++---+----

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typesampling dateisolation date
39270Sydney, NSWAustraliaAUSAustralia and Oceania
57162NSW,SydneyAustraliaAUSAustralia and OceaniaHuman blood1994
39270Sydney, New South WalesAustraliaAUSAustralia and OceaniaHuman, Blood1994

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood

Safety information

risk assessment

  • @ref: 39270
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39270

culture collection no.: CIP 105344, CCUG 46353

straininfo link

  • @ref: 94976
  • straininfo: 68849

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39270Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105344Collection of Institut Pasteur (CIP 105344)
57162Curators of the CCUGhttps://www.ccug.se/strain?id=46353Culture Collection University of Gothenburg (CCUG) (CCUG 46353)
68382Automatically annotated from API zym
94976Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID68849.1