Strain identifier

BacDive ID: 138112

Type strain: No

Species: Bibersteinia trehalosi

Strain history: CIP <- 1996, NCTC, Pasteurella haemolytica <- J. Fraser, Moredun Res. Inst., Edinburgh, UK: strain J592, "Pasteurella trehalosi"

NCBI tax ID(s): 47735 (species)

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General

@ref: 39120

BacDive-ID: 138112

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, rod-shaped

description: Bibersteinia trehalosi CIP 104864 is a facultative anaerobe, mesophilic, Gram-negative bacterium of the family Pasteurellaceae.

NCBI tax id

  • NCBI tax id: 47735
  • Matching level: species

strain history

  • @ref: 39120
  • history: CIP <- 1996, NCTC, Pasteurella haemolytica <- J. Fraser, Moredun Res. Inst., Edinburgh, UK: strain J592, "Pasteurella trehalosi"

doi: 10.13145/bacdive138112.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Bibersteinia
  • species: Bibersteinia trehalosi
  • full scientific name: Bibersteinia trehalosi (Sneath and Stevens 1990) Blackall et al. 2007
  • synonyms

    • @ref: 20215
    • synonym: Pasteurella trehalosi

@ref: 39120

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Bibersteinia

species: Bibersteinia trehalosi

type strain: no

Morphology

cell morphology

  • @ref: 39120
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 39120
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39120MEDIUM 118 - for Pasteurella, Actinobacillus and Psychrobacter frigidicolayesDistilled water make up to (1000.000 ml);Yeast extract (1.000 g);Tryptocasein soy agar (40.000 g)
39120CIP Medium 118-byeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=118-b

culture temp

@refgrowthtypetemperaturerange
39120positivegrowth37mesophilic
39120positivegrowth30-41
39120nogrowth15psychrophilic
39120nogrowth25mesophilic
39120nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 39120
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-galactose-builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754
39120citrate-carbon source16947
39120esculin-hydrolysis4853
39120glucose+fermentation17234
39120hippurate-hydrolysis606565
39120lactose-fermentation17716
39120nitrate+reduction17632
39120nitrite-reduction16301
39120sodium thiosulfate-builds gas from132112

metabolite production

  • @ref: 39120
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3912015688acetoin+
3912017234glucose-

enzymes

@refvalueactivityec
39120oxidase+
39120beta-galactosidase-3.2.1.23
39120alcohol dehydrogenase-1.1.1.1
39120catalase+1.11.1.6
39120gamma-glutamyltransferase-2.3.2.2
39120lysine decarboxylase-4.1.1.18
39120ornithine decarboxylase-4.1.1.17
39120phenylalanine ammonia-lyase+4.3.1.24
39120tryptophan deaminase-
39120urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39120-+++-+----++--------

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
39120----+/------+/-+/-+/-----+/----+/------+/---+/-+/---------------+/---

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
39120---------------------------------------------------------------------------------------------------

Isolation, sampling and environmental information

isolation

@refcountryorigin.countrycontinentsample typeisolation date
39120United KingdomGBREurope
39120United KingdomGBREuropeAnimal, Sheep, lung1972

Safety information

risk assessment

  • @ref: 39120
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39120

culture collection no.: CIP 104864, NCTC 11549, CIP 103288

straininfo link

  • @ref: 94904
  • straininfo: 69634

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39120Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104864Collection of Institut Pasteur (CIP 104864)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
94904Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID69634.1