Strain identifier
BacDive ID: 137783
Type strain:
Species: Gardnerella vaginalis
Strain Designation: 585.85
Strain history: CIP <- 1985, Lab. Ident. Inst. Pasteur, Paris, France: strain 585.85 <- Poissy Hosp., Poissy, France
NCBI tax ID(s): 2702 (species)
General
@ref: 38721
BacDive-ID: 137783
keywords: Bacteria, anaerobe, mesophilic, Gram-positive, rod-shaped
description: Gardnerella vaginalis 585.85 is an anaerobe, mesophilic, Gram-positive bacterium of the family Bifidobacteriaceae.
NCBI tax id
- NCBI tax id: 2702
- Matching level: species
strain history
- @ref: 38721
- history: CIP <- 1985, Lab. Ident. Inst. Pasteur, Paris, France: strain 585.85 <- Poissy Hosp., Poissy, France
doi: 10.13145/bacdive137783.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Gardnerella
- species: Gardnerella vaginalis
- full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980
synonyms
@ref synonym 20215 Corynebacterium vaginale 20215 Haemophilus vaginalis
@ref: 38721
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Gardnerella
species: Gardnerella vaginalis
strain designation: 585.85
type strain: no
Morphology
cell morphology
- @ref: 38721
- gram stain: positive
- cell shape: rod-shaped
- motility: no
colony morphology
- @ref: 38721
Culture and growth conditions
culture medium
@ref | name | growth | composition | link |
---|---|---|---|---|
38721 | MEDIUM 26 - for Gardnerella and Propionibacterium lymphophilum | yes | Distilled water make up to (1000.000 ml);Horse serum (200.000 ml);Brainheart infusion (37.000 g);Maltose 10 % solution - M0173 (200.000 ml) | |
38721 | CIP Medium 252 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=252 | |
38721 | CIP Medium 26 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=26 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
38721 | positive | growth | 37 | mesophilic |
38721 | positive | growth | 30-37 | mesophilic |
38721 | no | growth | 10 | psychrophilic |
38721 | no | growth | 15 | psychrophilic |
38721 | no | growth | 41 | thermophilic |
38721 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 38721
- oxygen tolerance: anaerobe
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
38721 | NaCl | positive | growth | 0 % |
38721 | NaCl | no | growth | 2 % |
38721 | NaCl | no | growth | 4 % |
38721 | NaCl | no | growth | 6 % |
38721 | NaCl | no | growth | 8 % |
38721 | NaCl | no | growth | 10 % |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
38721 | 16947 | citrate | - | carbon source |
38721 | 4853 | esculin | - | hydrolysis |
38721 | 606565 | hippurate | + | hydrolysis |
38721 | 17632 | nitrate | - | reduction |
38721 | 16301 | nitrite | - | reduction |
38721 | 17632 | nitrate | + | respiration |
antibiotic resistance
- @ref: 38721
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: yes
- is resistant: no
metabolite production
- @ref: 38721
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | methylred-test |
---|---|---|---|---|
38721 | 15688 | acetoin | - | |
38721 | 17234 | glucose | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
38721 | oxidase | - | |
38721 | beta-galactosidase | - | 3.2.1.23 |
38721 | alcohol dehydrogenase | - | 1.1.1.1 |
38721 | gelatinase | - | |
38721 | amylase | + | |
38721 | DNase | - | |
38721 | caseinase | - | 3.4.21.50 |
38721 | catalase | - | 1.11.1.6 |
38721 | tween esterase | - | |
38721 | gamma-glutamyltransferase | - | 2.3.2.2 |
38721 | lecithinase | - | |
38721 | lipase | - | |
38721 | lysine decarboxylase | - | 4.1.1.18 |
38721 | ornithine decarboxylase | - | 4.1.1.17 |
38721 | phenylalanine ammonia-lyase | - | 4.3.1.24 |
38721 | tryptophan deaminase | - | |
38721 | urease | - | 3.5.1.5 |
68382 | alkaline phosphatase | - | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
38721 | - | - | + | + | - | + | - | - | - | - | + | + | - | - | - | + | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | geographic location | country | origin.country | continent | sample type | isolation date |
---|---|---|---|---|---|---|
38721 | Poissy | France | FRA | Europe | ||
38721 | Poissy | France | FRA | Europe | Human, Sperm | 1985 |
Safety information
risk assessment
- @ref: 38721
- biosafety level: 2
- biosafety level comment: Risk group (French classification)
External links
@ref: 38721
culture collection no.: CIP 101815
straininfo link
- @ref: 94603
- straininfo: 68606
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
38721 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20101815 | Collection of Institut Pasteur (CIP 101815) | |
68382 | Automatically annotated from API zym | |||
94603 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID68606.1 |