Strain identifier

BacDive ID: 137659

Type strain: No

Species: Providencia alcalifaciens

Strain Designation: B 105

Strain history: CIP <- 1953, NCTC <- 1942, H.T. Findlay, RAMC, Tidworth, UK <- A. Sachs, RAMC, Knutsford, UK: strain B 105

NCBI tax ID(s): 126385 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 38488

BacDive-ID: 137659

keywords: genome sequence, Bacteria, Gram-negative

description: Providencia alcalifaciens B 105 is a Gram-negative bacterium of the family Morganellaceae.

NCBI tax id

  • NCBI tax id: 126385
  • Matching level: species

strain history

  • @ref: 38488
  • history: CIP <- 1953, NCTC <- 1942, H.T. Findlay, RAMC, Tidworth, UK <- A. Sachs, RAMC, Knutsford, UK: strain B 105

doi: 10.13145/bacdive137659.20240916.9.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Morganellaceae
  • genus: Providencia
  • species: Providencia alcalifaciens
  • full scientific name: Providencia alcalifaciens (de Salles Gomes 1944) Ewing 1962 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Eberthella alcalifaciens
    20215Bacillus inconstans
    20215Proteus inconstans

@ref: 38488

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Morganellaceae

genus: Providencia

species: Providencia alcalifaciens

strain designation: B 105

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 100

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
38488MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
38488CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

  • @ref: 38488
  • growth: positive
  • type: growth
  • temperature: 30

Physiology and metabolism

spore formation

@refspore formationconfidence
69480no90.36
69481no100

Isolation, sampling and environmental information

isolation

@refcountryorigin.countrycontinentsample type
38488IndiaINDAsia
38488IndiaINDAsiaDysenteria

Safety information

risk assessment

  • @ref: 38488
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Providencia alcalifaciens NCTC6344GCA_900455135contigncbi126385
66792Providencia alcalifaciens strain NCTC6344126385.18wgspatric126385
66792Providencia alcalifaciens NCTC 63442850114440draftimg126385

Genome-based predictions

predictions

@reftraitmodeldescriptionpredictionconfidencetraining_data
69481spore-formingspore-formingAbility to form endo- or exosporesno100no
69480gram-positivegram-positivePositive reaction to Gram-stainingno100no
69480anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)no94.314no
69480spore-formingspore-formingAbility to form endo- or exosporesno90.36no
69480aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)no59.613no
69480thermophilicthermophileAbility to grow at temperatures above or equal to 45°Cno99yes
69480flagellatedmotile2+Ability to perform flagellated movementyes71.594no

External links

@ref: 38488

culture collection no.: CIP 53.43, NCTC 6344

straininfo link

  • @ref: 94500
  • straininfo: 69690

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
38488Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2053.43Collection of Institut Pasteur (CIP 53.43)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
94500Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID69690.1