Strain identifier
BacDive ID: 137578
Type strain: 
Species: Pseudidiomarina insulisalsae
Strain Designation: CVS-6
Strain history: CIP <- 2005, M.S. Da Costa, Coimbra Univ., Coimbra, Portugal: strain CVS-6
NCBI tax ID(s): 575789 (species)
version 8.1 (current version)
General
@ref: 38332
BacDive-ID: 137578
keywords: Bacteria, mesophilic, Gram-negative, rod-shaped
description: Pseudidiomarina insulisalsae CVS-6 is a mesophilic, Gram-negative, rod-shaped bacterium of the family Idiomarinaceae.
NCBI tax id
- NCBI tax id: 575789
- Matching level: species
strain history
- @ref: 38332
- history: CIP <- 2005, M.S. Da Costa, Coimbra Univ., Coimbra, Portugal: strain CVS-6
doi: 10.13145/bacdive137578.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Idiomarinaceae
- genus: Pseudidiomarina
- species: Pseudidiomarina insulisalsae
- full scientific name: Pseudidiomarina insulisalsae (Taborda et al. 2010) Liu et al. 2019
synonyms
- @ref: 20215
- synonym: Idiomarina insulisalsae
@ref: 38332
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Idiomarinaceae
genus: Pseudidiomarina
species: Pseudidiomarina insulisalsae
strain designation: CVS-6
type strain: yes
Morphology
cell morphology
- @ref: 38332
- gram stain: negative
- cell shape: rod-shaped
- motility: no
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 38332 | Marine agar (MA) | yes | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |
| 38332 | CIP Medium 13 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13 |
culture temp
- @ref: 38332
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 38332 | 17632 | nitrate | - | reduction |
| 38332 | 16301 | nitrite | - | reduction |
metabolite production
- @ref: 38332
- Chebi-ID: 35581
- metabolite: indole
- production: no
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 38332 | oxidase | + | |
| 38332 | catalase | + | 1.11.1.6 |
| 38332 | urease | - | 3.5.1.5 |
| 68382 | alkaline phosphatase | + | 3.1.3.1 |
| 68382 | esterase (C 4) | + | |
| 68382 | esterase lipase (C 8) | + | |
| 68382 | lipase (C 14) | - | |
| 68382 | leucine arylamidase | + | 3.4.11.1 |
| 68382 | valine arylamidase | - | |
| 68382 | cystine arylamidase | - | 3.4.11.3 |
| 68382 | trypsin | + | 3.4.21.4 |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 |
| 68382 | acid phosphatase | + | 3.1.3.2 |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | |
| 68382 | alpha-galactosidase | - | 3.2.1.22 |
| 68382 | beta-galactosidase | - | 3.2.1.23 |
| 68382 | beta-glucuronidase | - | 3.2.1.31 |
| 68382 | alpha-glucosidase | - | 3.2.1.20 |
| 68382 | beta-glucosidase | - | 3.2.1.21 |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
| 68382 | alpha-mannosidase | - | 3.2.1.24 |
| 68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
| @ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38332 | - | + | + | + | - | + | - | - | + | + | + | + | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
| @ref | geographic location | country | origin.country | continent | sample type | isolation date |
|---|---|---|---|---|---|---|
| 38332 | llha do Sal, Cabo Verde | Portugal | PRT | Europe | ||
| 38332 | Llha do Sal | Cape Verde | CPV | Africa | Marine solar saltern | 2004 |
Safety information
risk assessment
- @ref: 38332
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
External links
@ref: 38332
culture collection no.: CIP 108836, LMG 23123
straininfo link
- @ref: 94438
- straininfo: 264599
literature
- topic: Phylogeny
- Pubmed-ID: 19625151
- title: Description of Idiomarina insulisalsae sp. nov., isolated from the soil of a sea salt evaporation pond, proposal to transfer the species of the genus Pseudidiomarina to the genus Idiomarina and emended description of the genus Idiomarina.
- authors: Taborda M, Antunes A, Tiago I, Verissimo A, Nobre MF, da Costa MS
- journal: Syst Appl Microbiol
- DOI: 10.1016/j.syapm.2009.06.005
- year: 2009
- mesh: Alteromonadaceae/classification/genetics/isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, Cabo Verde, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Fatty Acids/analysis, Gammaproteobacteria/classification/genetics, Genes, rRNA, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*chemistry, Sequence Analysis, DNA, *Sodium Chloride, *Soil Microbiology, Species Specificity
- topic2: Genetics
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 38332 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20108836 | Collection of Institut Pasteur (CIP 108836) | |
| 68382 | Automatically annotated from API zym | |||
| 94438 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID264599.1 |