Strain identifier

BacDive ID: 137515

Type strain: No

Species: Shewanella algae

Strain history: CIP <- 1968, M. Piéchaud, Inst. Pasteur, Paris, France, Alteromonas putrefaciens, Shewanella putrefaciens <- C. Richard, Inst. Pasteur, Tanger, Morocco: strain 792/B/68, Pseudomonas rubescens

NCBI tax ID(s): 38313 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 38050

BacDive-ID: 137515

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Shewanella algae CIP 68.20 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Shewanellaceae.

NCBI tax id

  • NCBI tax id: 38313
  • Matching level: species

strain history

  • @ref: 38050
  • history: CIP <- 1968, M. Piéchaud, Inst. Pasteur, Paris, France, Alteromonas putrefaciens, Shewanella putrefaciens <- C. Richard, Inst. Pasteur, Tanger, Morocco: strain 792/B/68, Pseudomonas rubescens

doi: 10.13145/bacdive137515.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Shewanellaceae
  • genus: Shewanella
  • species: Shewanella algae
  • full scientific name: Shewanella algae corrig. Simidu et al. 1990
  • synonyms

    @refsynonym
    20215Shewanella haliotis
    20215Shewanella alga
    20215Shewanella upenei

@ref: 38050

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Shewanellaceae

genus: Shewanella

species: Shewanella algae

type strain: no

Morphology

cell morphology

  • @ref: 38050
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
38050MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
38050CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
38050positivegrowth25mesophilic
38050positivegrowth25-41
38050nogrowth5psychrophilic
38050nogrowth10psychrophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 38050
  • oxygen tolerance: obligate aerobe

halophily

  • @ref: 38050
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3805016947citrate-carbon source
380504853esculin-hydrolysis
3805017632nitrate+reduction
3805016301nitrite+reduction
38050132112sodium thiosulfate+builds gas from
3805017632nitrate+respiration

antibiotic resistance

  • @ref: 38050
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 38050
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
38050oxidase+
38050beta-galactosidase-3.2.1.23
38050alcohol dehydrogenase-1.1.1.1
38050gelatinase+
38050amylase-
38050DNase+
38050caseinase+3.4.21.50
38050catalase+1.11.1.6
38050tween esterase+
38050lecithinase+
38050lipase+
38050lysine decarboxylase-4.1.1.18
38050ornithine decarboxylase+4.1.1.17
38050protease+
38050tryptophan deaminase-
38050urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
38050-+++-+---+++-----+--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
38050-------------------+-----------------------------+---------+------------+--+++-++-----+-+++--++-++-

Isolation, sampling and environmental information

isolation

@refcountryorigin.countrycontinentsample typeisolation date
38050MoroccoMARAfrica
38050MoroccoMARAfricaHuman, Cerebrospinal abscess1968

Safety information

risk assessment

  • @ref: 38050
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 38050

culture collection no.: CIP 68.20

straininfo link

  • @ref: 94390
  • straininfo: 70079

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
38050Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2068.20Collection of Institut Pasteur (CIP 68.20)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68382Automatically annotated from API zym
94390Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID70079.1