Strain identifier

BacDive ID: 137484

Type strain: No

Species: Rhodococcus equi

Strain Designation: 16.111

Strain history: CIP <- 1958, P. Boulay, Laigle Lab., France: strain 16.111, Corynebacterium equi

NCBI tax ID(s): 43767 (species)

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General

@ref: 38017

BacDive-ID: 137484

keywords: obligate aerobe, mesophilic, Gram-positive, oval-shaped

description: Rhodococcus equi 16.111 is an obligate aerobe, mesophilic, Gram-positive prokaryote.

NCBI tax id

  • NCBI tax id: 43767
  • Matching level: species

strain history

@refhistory
380171958, P. Boulay, Laigle Lab., France: strain 16.111, Corynebacterium equi
38017CIP <- 1958, P. Boulay, Laigle Lab., France: strain 16.111, Corynebacterium equi

doi: 10.13145/bacdive137484.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • genus: Rhodococcus
  • species: Rhodococcus equi
  • full scientific name: Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Prescottella equi
    20215Corynebacterium equi
    20215Nocardia restricta
    20215Proactinomyces restrictus
    20215Prescottia equi

@ref: 38017

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Nocardiaceae

genus: Rhodococcus

species: Rhodococcus equi

strain designation: 16.111

type strain: no

Morphology

cell morphology

  • @ref: 38017
  • gram stain: positive
  • cell shape: oval-shaped
  • motility: no

colony morphology

  • @ref: 38017

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
38017MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
38017CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
38017positivegrowth30mesophilic
38017positivegrowth10-41
38017nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 38017
  • oxygen tolerance: obligate aerobe

halophily

  • @ref: 38017
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-10 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose-builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose-builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose-builds acid from15824
68371D-glucose-builds acid from17634
68371D-galactose-builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose-builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754
38017citrate-carbon source16947
38017esculin-hydrolysis4853
38017hippurate-hydrolysis606565
38017nitrate+reduction17632
38017nitrite-reduction16301
38017nitrate-respiration17632

metabolite production

  • @ref: 38017
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3801715688acetoin-
3801717234glucose-

enzymes

@refvalueactivityec
38017oxidase-
38017beta-galactosidase+3.2.1.23
38017alcohol dehydrogenase-1.1.1.1
38017gelatinase+
38017amylase+
38017DNase-
38017caseinase-3.4.21.50
38017catalase+1.11.1.6
38017tween esterase+
38017lecithinase+
38017lipase+
38017lysine decarboxylase-4.1.1.18
38017ornithine decarboxylase-4.1.1.17
38017phenylalanine ammonia-lyase-4.3.1.24
38017urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
38017-+++-++---++---++---

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
38017-------------------------------------------------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
38017+------------------+-----------------------------+------------++----++-----+-+-++-------+-+-----+--

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
38017LaigleFranceFRAEurope
38017LaigleFranceFRAEuropeAnimal, Foal, carcass1958

Safety information

risk assessment

  • @ref: 38017
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 38017

culture collection no.: CIP 58.70

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
38017Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2058.70Collection of Institut Pasteur (CIP 58.70)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym