Strain identifier

BacDive ID: 137328

Type strain: No

Species: Clostridium perfringens

Strain Designation: 2001036

Strain history: CIP <- 2001, M.R. Popoff, Inst. Pasteur, Paris, France: strain 2001036

NCBI tax ID(s): 1502 (species)

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General

@ref: 37257

BacDive-ID: 137328

keywords: Bacteria, anaerobe, spore-forming, mesophilic, Gram-positive, rod-shaped

description: Clostridium perfringens 2001036 is an anaerobe, spore-forming, mesophilic bacterium of the family Clostridiaceae.

NCBI tax id

  • NCBI tax id: 1502
  • Matching level: species

strain history

@refhistory
372572001, M.R. Popoff, Inst. Pasteur, Paris, France: strain 2001036
37257CIP <- 2001, M.R. Popoff, Inst. Pasteur, Paris, France: strain 2001036

doi: 10.13145/bacdive137328.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Clostridiaceae
  • genus: Clostridium
  • species: Clostridium perfringens
  • full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Bacillus perfringens

@ref: 37257

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Eubacteriales

family: Clostridiaceae

genus: Clostridium

species: Clostridium perfringens

strain designation: 2001036

type strain: no

Morphology

cell morphology

  • @ref: 37257
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 37257
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
37257MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
37257CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6
37257CIP Medium 20yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=20

culture temp

  • @ref: 37257
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 37257
  • oxygen tolerance: anaerobe

spore formation

  • @ref: 37257
  • spore formation: yes

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3725717108D-arabinose-degradation
3725715824D-fructose+degradation
3725717634D-glucose+degradation
3725765327D-xylose-degradation
3725717057cellobiose-degradation
3725717716lactose+degradation
3725717306maltose+degradation
3725717814salicin-degradation
3725717992sucrose+degradation
372574853esculin-hydrolysis
3725717632nitrate-reduction
3725716301nitrite+reduction
3725717632nitrate+respiration

metabolite production

  • @ref: 37257
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
37257oxidase-
37257beta-galactosidase+3.2.1.23
37257gelatinase+
37257amylase+
37257DNase+
37257caseinase+3.4.21.50
37257catalase-1.11.1.6
37257tween esterase-
37257lecithinase+
37257lipase-
37257phenylalanine ammonia-lyase-4.3.1.24
37257protease-
37257urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase+3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
37257--+-----+-+--++-----

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
37257PloufraganFranceFRAEurope
37257PloufraganFranceFRAEuropeAnimal, Pig, feces2001

Safety information

risk assessment

  • @ref: 37257
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 37257

culture collection no.: CIP 106952

straininfo link

  • @ref: 94256
  • straininfo: 361831

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
37257Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106952Collection of Institut Pasteur (CIP 106952)
68382Automatically annotated from API zym
94256Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID361831.1