Strain identifier

BacDive ID: 137304

Type strain: No

Species: Kineosporia succinea

Strain Designation: I-092

Strain history: CIP <- 1998, JCM <- T. Itoh: strain I-092

NCBI tax ID(s): 84632 (species)

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General

@ref: 37223

BacDive-ID: 137304

keywords: Bacteria, obligate aerobe, mesophilic, Gram-positive, oval-shaped

description: Kineosporia succinea I-092 is an obligate aerobe, mesophilic, Gram-positive bacterium that was isolated from Leaves of cat-tail , pond.

NCBI tax id

  • NCBI tax id: 84632
  • Matching level: species

strain history

@refhistory
67770T. Itoh I-092.
37223CIP <- 1998, JCM <- T. Itoh: strain I-092

doi: 10.13145/bacdive137304.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kineosporiales
  • family: Kineosporiaceae
  • genus: Kineosporia
  • species: Kineosporia succinea
  • full scientific name: Kineosporia succinea Kudo et al. 1998

@ref: 37223

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Kineosporiales

family: Kineosporiaceae

genus: Kineosporia

species: Kineosporia succinea

strain designation: I-092

type strain: no

Morphology

cell morphology

  • @ref: 37223
  • gram stain: positive
  • cell shape: oval-shaped
  • motility: no

colony morphology

  • @ref: 37223

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
37223MEDIUM 122 - for StreptomycesyesDistilled water make up to (1000.000 ml);Agar (15.000 g);Yeast extract (2.000 g);Starch maize (10.000 g)
37223CIP Medium 122yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=122

culture temp

@refgrowthtypetemperature
37223positivegrowth30
67770positivegrowth28
37223positivegrowth15-37
37223nogrowth5
37223nogrowth41

Physiology and metabolism

oxygen tolerance

  • @ref: 37223
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
37223NaClpositivegrowth0-2 %
37223NaClnogrowth4 %
37223NaClnogrowth6 %
37223NaClnogrowth8 %
37223NaClnogrowth10 %

observation

  • @ref: 67770
  • observation: quinones: MK-9(H4)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3722316947citrate-carbon source
372234853esculin+hydrolysis
37223606565hippurate-hydrolysis
3722317632nitrate-reduction
3722316301nitrite-reduction
3722317632nitrate-respiration
68371Potassium 5-ketogluconate-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol+builds acid from
6837118287L-fucose+builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose+builds acid from
6837132528turanose+builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose+builds acid from
6837117992sucrose+builds acid from
6837128053melibiose-builds acid from
6837117057cellobiose+builds acid from
6837117814salicin+builds acid from
683714853esculin+builds acid from
6837118305arbutin+builds acid from
6837127613amygdalin-builds acid from
6837159640N-acetylglucosamine-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol+builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose+builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose+builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose+builds acid from
6837130849L-arabinose+builds acid from
6837117108D-arabinose+builds acid from
6837117113erythritol-builds acid from
6837117754glycerol+builds acid from

metabolite production

  • @ref: 37223
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3722315688acetoin-
3722317234glucose-

enzymes

@refvalueactivityec
68382alpha-fucosidase+3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
37223oxidase-
37223beta-galactosidase+3.2.1.23
37223alcohol dehydrogenase-1.1.1.1
37223gelatinase-
37223amylase+
37223DNase-
37223caseinase+3.4.21.50
37223catalase+1.11.1.6
37223tween esterase+
37223gamma-glutamyltransferase+2.3.2.2
37223lysine decarboxylase-4.1.1.18
37223ornithine decarboxylase-4.1.1.17
37223phenylalanine ammonia-lyase-4.3.1.24
37223tryptophan deaminase-
37223urease+3.5.1.5
68382valine arylamidase+
68382esterase lipase (C 8)+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
37223-+++-+++--++++-++--+

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
37223+-+++/-+---++++-+--+-----+++++/-+/--++---+/---+/-++--++----

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Leaves of cat-tail (Typha latifolia), pond
  • host species: Typha latifolia
  • geographic location: Saitama Pref.
  • country: Japan
  • origin.country: JPN
  • continent: Asia

Safety information

risk assessment

  • @ref: 37223
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

GC content

  • @ref: 67770
  • GC-content: 70.8
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 37223

culture collection no.: CIP 105750, JCM 9952

straininfo link

  • @ref: 94239
  • straininfo: 66056

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
37223Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105750Collection of Institut Pasteur (CIP 105750)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
94239Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID66056.1