Strain identifier

BacDive ID: 137149

Type strain: No

Species: Haemophilus ducreyi

Strain Designation: EF-4391-Ea

Strain history: CIP <- 1978, E. Falsen, Göteborg, Sweden: strain EF-4391-Ea

NCBI tax ID(s): 730 (species)

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General

@ref: 37013

BacDive-ID: 137149

keywords: Bacteria, microaerophile

description: Haemophilus ducreyi EF-4391-Ea is a microaerophile bacterium that was isolated from Human wound,penis,43 yr-old sailor.

NCBI tax id

  • NCBI tax id: 730
  • Matching level: species

strain history

  • @ref: 37013
  • history: CIP <- 1978, E. Falsen, Göteborg, Sweden: strain EF-4391-Ea

doi: 10.13145/bacdive137149.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Haemophilus
  • species: Haemophilus ducreyi
  • full scientific name: Haemophilus ducreyi (Neveu-Lemaire 1921) Bergey et al. 1923 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Coccobacillus ducreyi

@ref: 37013

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Haemophilus

species: Haemophilus ducreyi

strain designation: EF-4391-Ea

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
37013MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and NeisseriayesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml)
37013CIP Medium 10yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=10

culture temp

@refgrowthtypetemperature
37013positivegrowth30
44742positivegrowth33

Physiology and metabolism

oxygen tolerance

  • @ref: 44742
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose-builds acid from
6837717306maltose-builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase+3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    44742C14:017.814
    44742C16:028.816
    44742C18:00.918
    44742C13:0 ISO 2OH0.413.814
    44742C14:0 3OH/C16:1 ISO I5.415.485
    44742C16:1 ω7c43.315.819
    44742C18:1 ω7c /12t/9t1.317.824
    44742C18:2 ω6,9c/C18:0 ANTE0.817.724
    44742unknown 14.5030.314.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
44742-+---+----++--------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
44742++------+----

Isolation, sampling and environmental information

isolation

@refsample typesampling datecountrycontinentgeographic locationorigin.countryisolation date
44742Human wound,penis,43 yr-old sailor1975-04-01CeylonAsia
37013Human, Penis woundSwedenEuropeGöteborgSWE1975

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body-Site#Other#Wound
#Host Body-Site#Urogenital tract

Safety information

risk assessment

  • @ref: 37013
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 37013

culture collection no.: CIP 78.66, ATCC 51565, CCUG 4391, CCUG 4391 Ea

straininfo link

  • @ref: 94112
  • straininfo: 54245

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
37013Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2078.66Collection of Institut Pasteur (CIP 78.66)
44742Curators of the CCUGhttps://www.ccug.se/strain?id=4391Culture Collection University of Gothenburg (CCUG) (CCUG 4391 Ea)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
94112Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID54245.1