Strain identifier

BacDive ID: 137136

Type strain: No

Species: Clostridium sporogenes

Strain Designation: AU298

Strain history: CIP <- 2003, M.R. Popoff, Inst. Pasteur, Paris, France: strain AU298 <- A.R. Prévot

NCBI tax ID(s): 1509 (species)

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General

@ref: 36994

BacDive-ID: 137136

keywords: Bacteria, anaerobe, spore-forming, mesophilic, Gram-positive, motile, rod-shaped

description: Clostridium sporogenes AU298 is an anaerobe, spore-forming, mesophilic bacterium of the family Clostridiaceae.

NCBI tax id

  • NCBI tax id: 1509
  • Matching level: species

strain history

  • @ref: 36994
  • history: CIP <- 2003, M.R. Popoff, Inst. Pasteur, Paris, France: strain AU298 <- A.R. Prévot

doi: 10.13145/bacdive137136.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Clostridiaceae
  • genus: Clostridium
  • species: Clostridium sporogenes
  • full scientific name: Clostridium sporogenes (Metchnikoff 1908) Bergey et al. 1923 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Bacillus sporogenes

@ref: 36994

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Eubacteriales

family: Clostridiaceae

genus: Clostridium

species: Clostridium sporogenes

strain designation: AU298

type strain: no

Morphology

cell morphology

  • @ref: 36994
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 36994

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
36994MEDIUM 20 - for Anaerobic bacteriayesAgar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
36994CIP Medium 20yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=20

culture temp

  • @ref: 36994
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 36994
  • oxygen tolerance: anaerobe

spore formation

  • @ref: 36994
  • spore formation: yes

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3699417108D-arabinose-degradation
3699415824D-fructose+degradation
3699417634D-glucose+degradation
3699465327D-xylose-degradation
3699417057cellobiose-degradation
3699417716lactose-degradation
3699417306maltose+degradation
3699417814salicin+degradation
3699417992sucrose-degradation
369944853esculin+hydrolysis
3699417632nitrate-reduction
3699416301nitrite+reduction
3699417632nitrate+respiration

metabolite production

  • @ref: 36994
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase-
68382acid phosphatase-3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382valine arylamidase-
68382leucine arylamidase-3.4.11.1
68382lipase (C 14)-
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382alkaline phosphatase-3.1.3.1
36994oxidase-
36994beta-galactosidase-3.2.1.23
36994gelatinase+
36994amylase-
36994DNase+
36994caseinase-3.4.21.50
36994catalase-1.11.1.6
36994tween esterase-
36994lecithinase+
36994lipase+
36994protease-
36994urease-3.5.1.5
68382alpha-mannosidase-3.2.1.24
68382beta-galactosidase-3.2.1.23

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
36994--------------------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentisolation date
36994LausanneSwitzerlandCHEEurope
36994LausanneSwitzerlandCHEEurope1947

Safety information

risk assessment

  • @ref: 36994
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 36994

culture collection no.: CIP 108178

straininfo link

  • @ref: 94099
  • straininfo: 395488

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
36994Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20108178Collection of Institut Pasteur (CIP 108178)
68382Automatically annotated from API zym
94099Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID395488.1