Strain identifier

BacDive ID: 137012

Type strain: No

Species: Mycobacterium avium

Strain Designation: 68257

Strain history: CIP <- 2008, M. Drancourt, Timone Hosp., Marseille, France: strain 68257

NCBI tax ID(s): 1764 (species)

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General

@ref: 36838

BacDive-ID: 137012

keywords: Bacteria, obligate aerobe, mesophilic, rod-shaped

description: Mycobacterium avium 68257 is an obligate aerobe, mesophilic, rod-shaped bacterium of the family Mycobacteriaceae.

NCBI tax id

  • NCBI tax id: 1764
  • Matching level: species

strain history

@refhistory
368382008, M. Drancourt, La Timone Hosp., Marseille, France: strain 68257
36838CIP <- 2008, M. Drancourt, Timone Hosp., Marseille, France: strain 68257

doi: 10.13145/bacdive137012.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Mycobacteriaceae
  • genus: Mycobacterium
  • species: Mycobacterium avium
  • full scientific name: Mycobacterium avium Chester 1901 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Mycobacterium bouchedurhonense

@ref: 36838

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Mycobacteriaceae

genus: Mycobacterium

species: Mycobacterium avium

strain designation: 68257

type strain: no

Morphology

cell morphology

  • @ref: 36838
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
36838MEDIUM 93 - for Mycobacterium avium subsp. sylvaticumyesDistilled water make up to (900.000 ml);Glycerol (4.500 ml);Middlebrook7H10 agar (17.000 g);Middelbrook OADC enrichment (100.000 ml)
36838CIP Medium 93yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=93

culture temp

  • @ref: 36838
  • growth: positive
  • type: growth
  • temperature: 30

Physiology and metabolism

oxygen tolerance

  • @ref: 36838
  • oxygen tolerance: obligate aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3683817632nitrate+reduction
3683816301nitrite-reduction

metabolite production

  • @ref: 36838
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382beta-glucosidase-3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase+3.4.11.3
68382valine arylamidase-
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
36838oxidase-
36838catalase+1.11.1.6
36838urease-3.5.1.5
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382leucine arylamidase+3.4.11.1

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
36838-+++-+-++-++--------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample type
36838MarseilleFranceFRAEurope
36838MarseilleFranceFRAEuropeHuman, Spit

Safety information

risk assessment

  • @ref: 36838
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 36838

culture collection no.: CIP 109826

straininfo link

  • @ref: 94001
  • straininfo: 395678

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
36838Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20109826Collection of Institut Pasteur (CIP 109826)
68382Automatically annotated from API zym
94001Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID395678.1