Strain identifier
version 7.1 (current version)
General
@ref: 36745
BacDive-ID: 136954
keywords: genome sequence, Bacteria, mesophilic
description: Staphylococcus aureus CIP 108540 is a mesophilic bacterium of the family Staphylococcaceae.
NCBI tax id
- NCBI tax id: 1280
- Matching level: species
doi: 10.13145/bacdive136954.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Staphylococcaceae
- genus: Staphylococcus
- species: Staphylococcus aureus
- full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Staphylococcus aureus subsp. anaerobius
@ref: 36745
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Staphylococcaceae
genus: Staphylococcus
species: Staphylococcus aureus
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: positive
- confidence: 94.321
Culture and growth conditions
culture medium
- @ref: 36745
- name: MEDIUM 72- for trypto casein soja agar
- growth: yes
- composition: Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
culture temp
- @ref: 36745
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: no
- confidence: 89.701
halophily
- @ref: 69480
- halophily level: halophilic
- confidence: 96.488
Isolation, sampling and environmental information
isolation
- @ref: 36745
- geographic location: Paris
- country: France
- origin.country: FRA
- continent: Europe
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Staphylococcus aureus CIP 108540 | GCA_003546055 | contig | ncbi | 1280 |
| 66792 | Staphylococcus aureus strain CIP 108540 | 1280.17978 | wgs | patric | 1280 |
External links
@ref: 36745
culture collection no.: CIP 108540
straininfo link
- @ref: 20218
- passport: http://www.straininfo.net/strains/841128
literature
- topic: Genetics
- Pubmed-ID: 30553115
- title: Draft genome sequence of a human-associated streptogramin-resistant Staphylococcus aureus.
- authors: Gupta SK, Sharma P, Barrett JB, Hiott LM, Woodley TA, Frye JG, Jackson CR
- journal: J Glob Antimicrob Resist
- DOI: 10.1016/j.jgar.2018.11.021
- year: 2018
- mesh: Anti-Bacterial Agents/pharmacology, Drug Resistance, Multiple, Bacterial/*genetics, *Genome, Bacterial, Humans, Microbial Sensitivity Tests, Staphylococcus aureus/*drug effects/*genetics, Streptogramins/*pharmacology, Whole Genome Sequencing
- topic2: Pathogenicity
Reference
| @id | authors | title | doi/url | journal | pubmed | catalogue |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | StrainInfo introduces electronic passports for microorganisms. | 10.1016/j.syapm.2013.11.002 | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 36745 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/6174 | Collection of Institut Pasteur (CIP 108540) | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |