Strain identifier

BacDive ID: 136869

Type strain: No

Species: Achromobacter xylosoxidans

Strain history: CIP <- 1994, ATCC <- O. Felsenfeld

NCBI tax ID(s): 85698 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 9.3 (current version):
version 9.2:
version 9:
version 8.1:
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 9.3 (current version)

General

@ref: 36574

BacDive-ID: 136869

keywords: 16S sequence, Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Achromobacter xylosoxidans CIP 103961 is an obligate aerobe, mesophilic, Gram-negative bacterium that was isolated from Human blood.

NCBI tax id

  • NCBI tax id: 85698
  • Matching level: species

strain history

  • @ref: 36574
  • history: CIP <- 1994, ATCC <- O. Felsenfeld

doi: 10.13145/bacdive136869.20250331.9.3

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Alcaligenaceae
  • genus: Achromobacter
  • species: Achromobacter xylosoxidans
  • full scientific name: Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi and Yano 1981

  • synonyms

    @refsynonym
    20215Alcaligenes xylosoxydans
    20215Alcaligenes xylosoxidans
    20215Alcaligenes denitrificans subsp. xylosoxydans
    20215Achromobacter xylosoxidans

@ref: 36574

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Alcaligenaceae

genus: Achromobacter

species: Achromobacter xylosoxidans

type strain: no

Morphology

cell morphology

  • @ref: 36574
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 36574
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
36574MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
36574CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperature
36574positivegrowth30
36574positivegrowth15-41
36574nogrowth5
36574nogrowth45

Physiology and metabolism

oxygen tolerance

  • @ref: 36574
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
36574NaClpositivegrowth0-6 %
36574NaClnogrowth8 %
36574NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3657416947citrate+carbon source
365744853esculin-hydrolysis
36574606565hippurate+hydrolysis
3657417632nitrate+builds gas from
3657417632nitrate+reduction
3657416301nitrite+builds gas from
3657416301nitrite+reduction
3657415792malonate-assimilation
3657417632nitrate+respiration
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

antibiotic resistance

  • @ref: 36574
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
3657435581indoleno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-testmethylred-test
6836935581indole-
3657415688acetoin-
3657417234glucose-

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase-
68382acid phosphatase+3.1.3.2
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382alkaline phosphatase+3.1.3.1
36574oxidase+
36574beta-galactosidase-3.2.1.23
36574alcohol dehydrogenase-1.1.1.1
36574gelatinase-
36574amylase-
36574DNase-
36574caseinase-3.4.21.50
36574catalase+1.11.1.6
36574gamma-glutamyltransferase-2.3.2.2
36574lecithinase-
36574lipase-
36574lysine decarboxylase-4.1.1.18
36574ornithine decarboxylase-4.1.1.17
36574phenylalanine ammonia-lyase-4.3.1.24
36574protease-
36574tryptophan deaminase-
36574urease-3.5.1.5
68369gelatinase-
68369cytochrome oxidase-1.9.3.1
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    44522C12:00.312
    44522C14:00.914
    44522C15:00.315
    44522C16:038.616
    44522C17:00.517
    44522C18:01.118
    44522C12:0 2OH2.713.178
    44522C14:0 2OH3.115.205
    44522C14:0 3OH/C16:1 ISO I6.915.485
    44522C15:0 ISO 3OH0.516.135
    44522C16:1 ω7c11.215.819
    44522C16:1 ω7c DMA4.216.288
    44522C17:0 CYCLO26.116.888
    44522C18:1 ω7c /12t/9t2.217.824
    44522Unidentified1.117.203
    44522unknown 18.4450.418.445
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
44522-+---+---++---------
36574-+++-+----+---------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
44522+-------------++++++-

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
36574+---+----------------+---------+-----------++-++++++++----+-++---++------+-++++++++--+-++++++++-+++

Isolation, sampling and environmental information

isolation

@refsample typesampling dategeographic locationcountryorigin.countrycontinent
44522Human blood1950ManchesterUnited KingdomGBREurope
36574Sepsis

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood

Safety information

risk assessment

  • @ref: 36574
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
124043Achromobacter xylosoxidans subsp. xylosoxidans 16S ribosomal RNA gene, partial sequence.AF4110211490nuccore85698
124043Achromobacter sp. CCUG 2349 partial 16S rRNA gene, strain CCUG 2349HG423402455nuccore85698

External links

@ref: 36574

culture collection no.: CIP 103961, ATCC 9220, NCTC 8764, CCUG 2349, LMG 3512, LMG 3468

straininfo link

  • @ref: 93895
  • straininfo: 92103

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
36574Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103961Collection of Institut Pasteur (CIP 103961)
44522Curators of the CCUGhttps://www.ccug.se/strain?id=2349Culture Collection University of Gothenburg (CCUG) (CCUG 2349)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
93895Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID92103.1
124043Isabel Schober, Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy