Strain identifier

BacDive ID: 136747

Type strain: No

Species: Mycobacterium smegmatis

Strain history: CIP <- 1956, CCTM <- NCTC

NCBI tax ID(s): 1772 (species)

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General

@ref: 36287

BacDive-ID: 136747

keywords: Bacteria, obligate aerobe, mesophilic

description: Mycobacterium smegmatis CIP 56.5 is an obligate aerobe, mesophilic bacterium of the family Mycobacteriaceae.

NCBI tax id

  • NCBI tax id: 1772
  • Matching level: species

strain history

  • @ref: 36287
  • history: CIP <- 1956, CCTM <- NCTC

doi: 10.13145/bacdive136747.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Mycobacteriaceae
  • genus: Mycobacterium
  • species: Mycobacterium smegmatis
  • full scientific name: Mycobacterium smegmatis (Trevisan 1889) Lehmann and Neumann 1899 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Bacillus smegmatis
    20215Mycolicibacterium smegmatis

@ref: 36287

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Mycobacteriaceae

genus: Mycobacterium

species: Mycobacterium smegmatis

type strain: no

Morphology

cell morphology

  • @ref: 36287
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthlink
36287MEDIUM 55 - for Mycobacteriumyes
36287CIP Medium 55yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=55

culture temp

@refgrowthtypetemperature
36287positivegrowth37
36287positivegrowth25-45
36287nogrowth10

Physiology and metabolism

oxygen tolerance

  • @ref: 36287
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
36287NaClpositivegrowth0-6 %
36287NaClnogrowth8 %
36287NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3628716947citrate-carbon source
362874853esculin-hydrolysis
36287606565hippurate-hydrolysis
3628717632nitrate+reduction
3628716301nitrite-reduction
3628717632nitrate-respiration

metabolite production

  • @ref: 36287
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3628715688acetoin-
3628717234glucose-

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin+3.4.21.4
68382cystine arylamidase+3.4.11.3
68382valine arylamidase+
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase-3.1.3.1
36287oxidase-
36287beta-galactosidase-3.2.1.23
36287alcohol dehydrogenase-1.1.1.1
36287amylase-
36287DNase-
36287caseinase-3.4.21.50
36287catalase+1.11.1.6
36287tween esterase+
36287gamma-glutamyltransferase-2.3.2.2
36287lecithinase-
36287lysine decarboxylase-4.1.1.18
36287ornithine decarboxylase-4.1.1.17
36287phenylalanine ammonia-lyase-4.3.1.24
36287tryptophan deaminase-
36287urease+3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
36287--++-++++-++----+---

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
36287-+-++---------------+--+---+-+-+++--++--+--+-----------+++--+------+--+-+--+------+-----+-+----++--

Safety information

risk assessment

  • @ref: 36287
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 36287

culture collection no.: CIP 56.5, CCTM 170, NCTC 53

straininfo link

  • @ref: 93815
  • straininfo: 69396

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
36287Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2056.5Collection of Institut Pasteur (CIP 56.5)
68382Automatically annotated from API zym
93815Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID69396.1