Strain identifier

BacDive ID: 136675

Type strain: No

Species: Bordetella pertussis

Strain Designation: R665

Strain history: CIP <- 2002, Lab. Identification, Inst. Pasteur, Paris, France: strain R665 <- Blanc Lab., France

NCBI tax ID(s): 520 (species)

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General

@ref: 36156

BacDive-ID: 136675

keywords: Bacteria, mesophilic, Gram-negative, oval-shaped

description: Bordetella pertussis R665 is a mesophilic, Gram-negative, oval-shaped bacterium that was isolated from Human, Nose.

NCBI tax id

  • NCBI tax id: 520
  • Matching level: species

strain history

  • @ref: 36156
  • history: CIP <- 2002, Lab. Identification, Inst. Pasteur, Paris, France: strain R665 <- Blanc Lab., France

doi: 10.13145/bacdive136675.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Alcaligenaceae
  • genus: Bordetella
  • species: Bordetella pertussis
  • full scientific name: Bordetella pertussis (Bergey et al. 1923) Moreno-López 1952 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Hemophilus pertussis

@ref: 36156

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Alcaligenaceae

genus: Bordetella

species: Bordetella pertussis

strain designation: R665

type strain: no

Morphology

cell morphology

  • @ref: 36156
  • gram stain: negative
  • cell shape: oval-shaped
  • motility: no

colony morphology

  • @ref: 36156
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
36156MEDIUM 440 - for BordetellayesDistilled water make up to (1000.000 ml);Glycerol (10.000 ml);Bordet gengou agar (30.000 g);Sheep blood (200.000 ml)
36156CIP Medium 440yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=440

culture temp

@refgrowthtypetemperaturerange
36156positivegrowth37mesophilic
36156positivegrowth30-37mesophilic
36156nogrowth5psychrophilic
36156nogrowth15psychrophilic
36156nogrowth25mesophilic
36156nogrowth41thermophilic
36156nogrowth45thermophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3615616947citrate-carbon source
361564853esculin-hydrolysis
3615617632nitrate-builds gas from
3615617632nitrate-reduction
3615616301nitrite-builds gas from
3615616301nitrite-reduction
3615615792malonate-assimilation
3615617234glucose-degradation

antibiotic resistance

  • @ref: 36156
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 36156
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3615615688acetoin-
3615617234glucose-

enzymes

@refvalueactivityec
36156oxidase+
36156beta-galactosidase-3.2.1.23
36156alcohol dehydrogenase-1.1.1.1
36156gelatinase-
36156catalase+1.11.1.6
36156gamma-glutamyltransferase+2.3.2.2
36156lysine decarboxylase-4.1.1.18
36156ornithine decarboxylase-4.1.1.17
36156phenylalanine ammonia-lyase-4.3.1.24
36156tryptophan deaminase-
36156urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
36156--++-+---+++--------

Isolation, sampling and environmental information

isolation

  • @ref: 36156
  • sample type: Human, Nose
  • isolation date: 1971

Safety information

risk assessment

  • @ref: 36156
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 36156

culture collection no.: CIP 107596

straininfo link

  • @ref: 93771
  • straininfo: 361775

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
36156Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107596Collection of Institut Pasteur (CIP 107596)
68382Automatically annotated from API zym
93771Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID361775.1