Strain identifier

BacDive ID: 136573

Type strain: No

Species: Vibrio cholerae

Strain Designation: 2829

Strain history: CIP <- 2001, A. Hesselbjerg, Statens Serum Inst., Copenhagen, Denmark: strain 2829 <- Hvidore Hosp., Copenhagen, Denmark <- Nastved Hosp., Denmark

NCBI tax ID(s): 666 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 8.1 (current version)

General

@ref: 36012

BacDive-ID: 136573

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Vibrio cholerae 2829 is a facultative anaerobe, mesophilic, Gram-negative bacterium of the family Vibrionaceae.

NCBI tax id

  • NCBI tax id: 666
  • Matching level: species

strain history

  • @ref: 36012
  • history: CIP <- 2001, A. Hesselbjerg, Statens Serum Inst., Copenhagen, Denmark: strain 2829 <- Hvidore Hosp., Copenhagen, Denmark <- Nastved Hosp., Denmark

doi: 10.13145/bacdive136573.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio cholerae
  • full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Vibrio albensis

@ref: 36012

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio cholerae

strain designation: 2829

type strain: no

Morphology

cell morphology

  • @ref: 36012
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
36012MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
36012CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
36012positivegrowth30mesophilic
36012positivegrowth15-41
36012nogrowth5psychrophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 36012
  • oxygen tolerance: facultative anaerobe

halophily

  • @ref: 36012
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3601216947citrate+carbon source
360124853esculin-hydrolysis
3601217234glucose+fermentation
3601217716lactose-fermentation
3601217632nitrate+reduction
3601216301nitrite-reduction
36012132112sodium thiosulfate-builds gas from
3601217234glucose+degradation
3601217632nitrate-respiration

antibiotic resistance

  • @ref: 36012
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 36012
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3601215688acetoin-
3601217234glucose+

enzymes

@refvalueactivityec
36012oxidase+
36012beta-galactosidase+3.2.1.23
36012alcohol dehydrogenase-1.1.1.1
36012gelatinase+
36012amylase+
36012DNase+
36012caseinase+3.4.21.50
36012catalase+1.11.1.6
36012tween esterase+
36012gamma-glutamyltransferase+2.3.2.2
36012lecithinase+
36012lipase+
36012lysine decarboxylase+4.1.1.18
36012ornithine decarboxylase+4.1.1.17
36012phenylalanine ammonia-lyase-4.3.1.24
36012tryptophan deaminase-
36012urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
36012-++++++---++-+-+-+--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
36012++++---+-++--+---+-+-----------+-+---------------++--+-----++--------------+---++-----+--++++-+---+

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
36012SjallandDenmarkDNKEurope
36012SjallandDenmarkDNKEuropeEar swab1994

Safety information

risk assessment

  • @ref: 36012
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 36012

culture collection no.: CIP 106969

straininfo link

  • @ref: 93699
  • straininfo: 70597

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
36012Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106969Collection of Institut Pasteur (CIP 106969)
68382Automatically annotated from API zym
93699Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID70597.1