Strain identifier

BacDive ID: 136276

Type strain: No

Species: Pseudomonas oryzihabitans

Strain Designation: Cor

Strain history: CIP <- 1994, C. David, Robert Debré Hosp., Reims, France: strain Cor

NCBI tax ID(s): 47885 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 35629

BacDive-ID: 136276

keywords: Bacteria, mesophilic, Gram-negative, motile, rod-shaped

description: Pseudomonas oryzihabitans Cor is a mesophilic, Gram-negative, motile bacterium of the family Pseudomonadaceae.

NCBI tax id

  • NCBI tax id: 47885
  • Matching level: species

strain history

@refhistory
356291994, C. David, R. Debré Hosp., Reims, France: strain Cor
35629CIP <- 1994, C. David, Robert Debré Hosp., Reims, France: strain Cor

doi: 10.13145/bacdive136276.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas oryzihabitans
  • full scientific name: Pseudomonas oryzihabitans Kodama et al. 1985
  • synonyms

    @refsynonym
    20215Pseudomonas psychrotolerans
    20215Flavimonas oryzihabitans

@ref: 35629

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas oryzihabitans

strain designation: Cor

type strain: no

Morphology

cell morphology

  • @ref: 35629
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
35629MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
35629CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
35629positivegrowth30mesophilic
35629positivegrowth10-30
35629nogrowth5psychrophilic
35629nogrowth41thermophilic
35629nogrowth45thermophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3562916947citrate+carbon source
356294853esculin-hydrolysis
3562917632nitrate-reduction
3562916301nitrite-reduction
3562935020tributyrin-hydrolysis

antibiotic resistance

  • @ref: 35629
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

enzymes

@refvalueactivityec
35629oxidase-
35629beta-galactosidase-3.2.1.23
35629alcohol dehydrogenase-1.1.1.1
35629gelatinase-
35629amylase-
35629caseinase-3.4.21.50
35629catalase+1.11.1.6
35629tween esterase-
35629lysine decarboxylase-4.1.1.18
35629ornithine decarboxylase-4.1.1.17

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
35629+++++----++--------+++-+--+----+++--+--+---++--+++++-++++---+-+++------+++-+++-++-+-+---++++++++-++

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
35629ReimsFranceFRAEurope
35629ReimsFranceFRAEuropeHuman, Blood1993

Safety information

risk assessment

  • @ref: 35629
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 35629

culture collection no.: CIP 104149

straininfo link

  • @ref: 93473
  • straininfo: 69814

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
35629Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104149Collection of Institut Pasteur (CIP 104149)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
93473Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID69814.1