Strain identifier

BacDive ID: 136012

Type strain: No

Species: Shewanella algae

Strain history: CIP <- 1984, Lab. Ident. Inst. Pasteur, Paris, France: strain 797-84, Alteromonas putrefaciens, Shewanella putrefaciens <- Saint Brieuc Hosp., Saint Brieuc, France

NCBI tax ID(s): 38313 (species)

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General

@ref: 35310

BacDive-ID: 136012

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Shewanella algae CIP 101181 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Shewanellaceae.

NCBI tax id

  • NCBI tax id: 38313
  • Matching level: species

strain history

  • @ref: 35310
  • history: CIP <- 1984, Lab. Ident. Inst. Pasteur, Paris, France: strain 797-84, Alteromonas putrefaciens, Shewanella putrefaciens <- Saint Brieuc Hosp., Saint Brieuc, France

doi: 10.13145/bacdive136012.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Shewanellaceae
  • genus: Shewanella
  • species: Shewanella algae
  • full scientific name: Shewanella algae corrig. Simidu et al. 1990

  • synonyms

    @refsynonym
    20215Shewanella haliotis
    20215Shewanella alga
    20215Shewanella upenei

@ref: 35310

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Shewanellaceae

genus: Shewanella

species: Shewanella algae

type strain: no

Morphology

cell morphology

  • @ref: 35310
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
35310MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
35310CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
35310positivegrowth25mesophilic
35310positivegrowth10-41
35310nogrowth5psychrophilic
35310nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 35310
  • oxygen tolerance: obligate aerobe

halophily

  • @ref: 35310
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3531016947citrate-carbon source
353104853esculin-hydrolysis
3531017632nitrate+reduction
3531016301nitrite+reduction
35310132112sodium thiosulfate+builds gas from
3531017632nitrate+respiration

metabolite production

  • @ref: 35310
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
35310oxidase+
35310beta-galactosidase-3.2.1.23
35310alcohol dehydrogenase-1.1.1.1
35310gelatinase+
35310amylase-
35310DNase+
35310caseinase+3.4.21.50
35310catalase+1.11.1.6
35310tween esterase+
35310lecithinase+
35310lipase+
35310lysine decarboxylase-4.1.1.18
35310ornithine decarboxylase+4.1.1.17
35310protease+
35310tryptophan deaminase-
35310urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
35310-+++-+--++++-----+--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
35310-------------------------------------------------+---------+------------+--++--++-----+--++---+-++-

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
35310Saint-BrieucFranceFRAEurope
35310Saint BrieucFranceFRAEuropeHuman, Blood1984

Safety information

risk assessment

  • @ref: 35310
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 35310

culture collection no.: CIP 101181

straininfo link

  • @ref: 93263
  • straininfo: 70086

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
35310Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20101181Collection of Institut Pasteur (CIP 101181)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68382Automatically annotated from API zym
93263Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID70086.1