Strain identifier

BacDive ID: 135945

Type strain: No

Species: Latilactobacillus sakei

Strain Designation: 156

Strain history: CIP <- 2015, S. Chaillou, INRA, Jouy en Josas, France: strain 156

NCBI tax ID(s): 1599 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 35227

BacDive-ID: 135945

keywords: genome sequence, Bacteria, mesophilic

description: Latilactobacillus sakei 156 is a mesophilic bacterium of the family Lactobacillaceae.

NCBI tax id

  • NCBI tax id: 1599
  • Matching level: species

strain history

@refhistory
352272015, S. Chaillou, INRA, Jouy en Josas, France: strain 156
35227CIP <- 2015, S. Chaillou, INRA, Jouy en Josas, France: strain 156

doi: 10.13145/bacdive135945.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Latilactobacillus
  • species: Latilactobacillus sakei
  • full scientific name: Latilactobacillus sakei (Katagiri et al. 1934) Zheng et al. 2020
  • synonyms

    @refsynonym
    20215Lactobacillus sakei
    20215Lactobacillus bavaricus
    20215Lactobacillus sake

@ref: 35227

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Lactobacillus

species: Lactobacillus sakei

strain designation: 156

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram staincell shape
69480no93.117
69480100positive
35227nopositiverod-shaped

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
35227MEDIUM 40- for Lactobacillus and LeuconostocyesDistilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
35227CIP Medium 40yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=40

culture temp

  • @ref: 35227
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

spore formation

@refspore formationconfidence
69481no100
69480no99.993

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
35227Jouy en JosasFranceFRAEurope
35227Jouy en JosasFranceFRAEuropeFood, Meat material2015-10-05

Safety information

risk assessment

  • @ref: 35227
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

Genome sequences

  • @ref: 66792
  • description: Lactobacillus sakei strain J156
  • accession: 1599.105
  • assembly level: wgs
  • database: patric
  • NCBI tax ID: 1599

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno95.618no
gram-positiveyes97.033no
anaerobicno92.783no
aerobicno96.709no
halophileyes93.988no
spore-formingno94.207no
thermophileno99.58yes
glucose-utilyes90.755no
flagellatedno98.783no
glucose-fermentyes83no

External links

@ref: 35227

culture collection no.: CIP 110931

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
35227Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110931Collection of Institut Pasteur (CIP 110931)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1