Strain identifier

BacDive ID: 135911

Type strain: No

Species: Granulicatella elegans

Strain Designation: A-5980

Strain history: CIP <- 1998, A. Roggenkamp, Ludwig Maximilians Univ., Munich, Germany: strain A-5980 <- von Pettenkofer Inst.

NCBI tax ID(s): 137732 (species)

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General

@ref: 35186

BacDive-ID: 135911

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-positive, coccus-shaped

description: Granulicatella elegans A-5980 is a facultative anaerobe, mesophilic, Gram-positive bacterium of the family Carnobacteriaceae.

NCBI tax id

  • NCBI tax id: 137732
  • Matching level: species

strain history

  • @ref: 35186
  • history: CIP <- 1998, A. Roggenkamp, Ludwig Maximilians Univ., Munich, Germany: strain A-5980 <- von Pettenkofer Inst.

doi: 10.13145/bacdive135911.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Carnobacteriaceae
  • genus: Granulicatella
  • species: Granulicatella elegans
  • full scientific name: Granulicatella elegans (Roggenkamp et al. 1999) Collins and Lawson 2000

  • synonyms

    • @ref: 20215
    • synonym: Abiotrophia elegans

@ref: 35186

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Carnobacteriaceae

genus: Granulicatella

species: Granulicatella elegans

strain designation: A-5980

type strain: no

Morphology

cell morphology

  • @ref: 35186
  • gram stain: positive
  • cell shape: coccus-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
35186MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and NeisseriayesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml)
35186CIP Medium 10yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=10

culture temp

@refgrowthtypetemperature
35186positivegrowth37
35186positivegrowth25-41
35186nogrowth10
35186nogrowth45

Physiology and metabolism

oxygen tolerance

  • @ref: 35186
  • oxygen tolerance: facultative anaerobe

halophily

  • @ref: 35186
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 6.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
351864853esculin-hydrolysis
35186606565hippurate-hydrolysis
3518617632nitrate-reduction
3518616301nitrite-reduction

metabolite tests

  • @ref: 35186
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382beta-glucuronidase+3.2.1.31
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase (C 4)+
35186beta-galactosidase+3.2.1.23
35186alcohol dehydrogenase-1.1.1.1
35186catalase-1.11.1.6
35186gamma-glutamyltransferase-2.3.2.2
35186lysine decarboxylase-4.1.1.18
35186ornithine decarboxylase-4.1.1.17
68382trypsin-3.4.21.4
68382esterase lipase (C 8)+
68382alkaline phosphatase-3.1.3.1

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
35186--++-+----++--+-----

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample type
35186MunichGermanyDEUEurope
35186MünchenGermanyDEUEuropeHuman, Blood

Safety information

risk assessment

  • @ref: 35186
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 35186

culture collection no.: CIP 105512

straininfo link

  • @ref: 93180
  • straininfo: 68650

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
35186Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105512Collection of Institut Pasteur (CIP 105512)
68382Automatically annotated from API zym
93180Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID68650.1