Strain identifier

BacDive ID: 135910

Type strain: No

Species: Listeria monocytogenes

Strain history: CIP <- 1998, C. Jacquet, Inst. Pasteur, Paris, France: strain CLIP 74908 <- 1978, H. Seeliger, Würzburg, Germany: strain SLCC 2374

NCBI tax ID(s): 1639 (species)

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General

@ref: 35185

BacDive-ID: 135910

keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-positive, motile, rod-shaped

description: Listeria monocytogenes CIP 105457 is a facultative anaerobe, mesophilic, Gram-positive bacterium of the family Listeriaceae.

NCBI tax id

  • NCBI tax id: 1639
  • Matching level: species

strain history

@refhistory
67770CCM 5579 <-- H. P. R. Seeliger Li23 <-- J. S. Paterson <-- F. S. Jones and R. B. Little.
35185CIP <- 1998, C. Jacquet, Inst. Pasteur, Paris, France: strain CLIP 74908 <- 1978, H. Seeliger, Würzburg, Germany: strain SLCC 2374

doi: 10.13145/bacdive135910.20250331.9.3

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Listeriaceae
  • genus: Listeria
  • species: Listeria monocytogenes
  • full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Bacterium monocytogenes

@ref: 35185

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Listeriaceae

genus: Listeria

species: Listeria monocytogenes

type strain: no

Morphology

cell morphology

  • @ref: 35185
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 35185
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
35185MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
35185CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3
121129CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72
121129CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperature
35185positivegrowth30
67770positivegrowth37
35185positivegrowth10-41
35185nogrowth5
35185nogrowth45

Physiology and metabolism

oxygen tolerance

  • @ref: 35185
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
351854853esculin+hydrolysis
3518517632nitrate-reduction
3518516301nitrite-reduction
3518517632nitrate+respiration
68371Potassium 5-ketogluconate-builds acid from
6837159640N-acetylglucosamine+builds acid from
68371320061methyl alpha-D-glucopyranoside+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol+builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose-builds acid from
6837128066gentiobiose+builds acid from
6837117151xylitol+builds acid from
6837128087glycogen-builds acid from
6837116634raffinose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose+builds acid from
6837117992sucrose-builds acid from
6837128053melibiose-builds acid from
6837117306maltose+builds acid from
6837117057cellobiose+builds acid from
6837117814salicin+builds acid from
683714853esculin+builds acid from
6837118305arbutin+builds acid from
6837127613amygdalin+builds acid from
6837143943methyl alpha-D-mannoside+builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol-builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose+builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose-builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from

metabolite production

  • @ref: 35185
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3518515688acetoin+
3518517234glucose+

enzymes

@refvalueactivityec
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382lipase (C 14)-
68382esterase lipase (C 8)-
68382esterase (C 4)+
68382alkaline phosphatase-3.1.3.1
35185oxidase-
35185beta-galactosidase-3.2.1.23
35185alcohol dehydrogenase-1.1.1.1
35185catalase+1.11.1.6
35185lysine decarboxylase-4.1.1.18
35185ornithine decarboxylase-4.1.1.17
35185tryptophan deaminase-
35185urease-3.5.1.5
68382alpha-fucosidase-3.2.1.51
68382beta-glucosidase+3.2.1.21
68382trypsin-3.4.21.4

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
35185--+-------++---+++--

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
35185+/----------+++-+----++++++++++/---+-+/--+/--++-----+----

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
35185++-++----+-+---+-++-------+-+--+---------+---------------------------------------------------------

Isolation, sampling and environmental information

isolation

@refcountryorigin.countrycontinentsample typeisolation date
35185New zealandNZLAustralia and Oceania
67770Tissue, animal (ruminant brain)
35185New ZealandNZLAustralia and OceaniaAnimal, Ovine, brain1931

taxonmaps

  • @ref: 69479
  • File name: preview.99_71.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_32;96_57;97_60;98_65;99_71&stattab=map
  • Last taxonomy: Listeria monocytogenes
  • 16S sequence: LC504047
  • Sequence Identity:
  • Total samples: 28471
  • soil counts: 991
  • aquatic counts: 1408
  • animal counts: 25369
  • plant counts: 703

Safety information

risk assessment

  • @ref: 35185
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
67770Listeria monocytogenes JCM 7674 gene for 16S ribosomal RNA, partial sequenceLC5040471472nuccore1639
124043Listeria monocytogenes 16S ribosomal RNA gene, partial sequenceU84148335nuccore1639

Genome sequences

  • @ref: 66792
  • description: Listeria monocytogenes strain WSLC 1020
  • accession: 1639.1038
  • assembly level: complete
  • database: patric
  • NCBI tax ID: 1639

Genome-based predictions

predictions

@refmodeltraitdescriptionpredictionconfidencetraining_data
125438gram-positivegram-positivePositive reaction to Gram-stainingyes81.132no
125438anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)no90.366yes
125438spore-formingspore-formingAbility to form endo- or exosporesno51.639no
125438thermophilethermophilicAbility to grow at temperatures above or equal to 45°Cno95.434no
125438aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)no86.408yes
125438motile2+flagellatedAbility to perform flagellated movementyes65.516no
125439BacteriaNetspore_formationAbility to form endo- or exosporesno73.4
125439BacteriaNetmotilityAbility to perform movementno66.6
125439BacteriaNetgram_stainReaction to gram-stainingpositive69
125439BacteriaNetoxygen_toleranceOxygenic conditions needed for growthmicroaerophile88.9

External links

@ref: 35185

culture collection no.: CIP 105457, CIP 78.37, ATCC 19114, CIP 60.88, NCTC 5214, CECT 934, LMG 16783, WDCM 00110, JCM 7674, CCM 5579, CLIP 74908, SLCC 2374

straininfo link

  • @ref: 93179
  • straininfo: 14416

literature

topicPubmed-IDtitleauthorsjournalyearmeshtopic2DOI
Phylogeny2580906Vaccination against the intracellular bacterium Listeria monocytogenes with a clonotypic antiserum.Kaufmann SH, Eichmann K, Muller I, Wrazel LJJ Immunol1985Animals, Antigens, Bacterial/genetics, Bacterial Vaccines/*administration & dosage, Binding, Competitive, Clone Cells/immunology, Epitopes/immunology, Immune Sera/*administration & dosage/analysis/pharmacology, Listeria monocytogenes/immunology, Listeriosis/immunology/*prevention & control, Male, Mice, Mice, Inbred AKR, Mice, Inbred BALB C, Mice, Inbred C57BL, Species Specificity, T-Lymphocytes/*immunology
Enzymology6417944Infection, haemorrhagia and death of chick embryos experimentally inoculated with Listeria monocytogenes by the intra-allantoic route.Basher HA, Seaman A, Woodbine MZentralbl Bakteriol Mikrobiol Hyg A1983Allantois, Animals, Brain/microbiology, Chick Embryo, Hemorrhage/etiology, Listeria monocytogenes/isolation & purification, Listeriosis/*embryology/microbiology/pathology, Liver/pathology, Myocardium/pathology, NecrosisPhylogeny
Biotechnology11139015Behaviour of Listeria monocytogenes during the manufacture and ripening of Manchego and Chihuahua Mexican cheeses.Solano-Lopez C, Hernandez-Sanchez HInt J Food Microbiol2000Animals, Cheese/analysis/*microbiology, Colony Count, Microbial, Fermentation, Food Handling, *Food Microbiology, Hydrogen-Ion Concentration, Listeria monocytogenes/*growth & development, Milk/microbiology, Temperature, Time Factors10.1016/s0168-1605(00)00403-7
Biotechnology15366818Discrimination of intact and injured Listeria monocytogenes by Fourier transform infrared spectroscopy and principal component analysis.Lin M, Al-Holy M, Al-Qadiri H, Kang DH, Cavinato AG, Huang Y, Rasco BAJ Agric Food Chem2004Food Contamination/prevention & control, *Food Microbiology, Listeria monocytogenes/*chemistry/*isolation & purification, Sonication, *Spectroscopy, Fourier Transform InfraredEnzymology10.1021/jf049354q
Pathogenicity15686837Comparative assessment of acid, alkali and salt tolerance in Listeria monocytogenes virulent and avirulent strains.Liu D, Lawrence ML, Ainsworth AJ, Austin FWFEMS Microbiol Lett2005Acids/*pharmacology, Alkalies/*pharmacology, Animals, Colony Count, Microbial, Culture Media, Humans, Hydrogen-Ion Concentration, Listeria monocytogenes/*drug effects/growth & development/pathogenicity, Sodium Chloride/*pharmacology, TemperatureCultivation10.1016/j.femsle.2004.12.025
Pathogenicity17995738Effect of water phase salt content and storage temperature on Listeria monocytogenes survival in chum salmon (Oncorhynchus keta) roe and caviar (ikura).Shin JH, Rasco BAJ Food Sci2007Animals, Colony Count, Microbial, Consumer Product Safety, Dose-Response Relationship, Drug, Eggs/*microbiology, Fish Products/*microbiology, Food Handling/methods, Food Microbiology, Food Preservation/*methods, Humans, Listeria monocytogenes/drug effects/*growth & development, Oncorhynchus keta, Sodium Chloride/*pharmacology, Temperature, Time FactorsBiotechnology10.1111/j.1750-3841.2007.00385.x
Biotechnology19376467Evaluation of atmospheric pressure plasma to improve the safety of sliced cheese and ham inoculated by 3-strain cocktail Listeria monocytogenes.Song HP, Kim B, Choe JH, Jung S, Moon SY, Choe W, Jo CFood Microbiol2009*Atmospheric Pressure, Cheese/*microbiology, Colony Count, Microbial, Consumer Product Safety, *Electric Stimulation, Food Contamination/prevention & control, Food Microbiology, Food Preservation/*methods, Kinetics, Listeria monocytogenes/*growth & development, Meat Products/*microbiology, Microbial Viability, Plasma, Time FactorsEnzymology10.1016/j.fm.2009.02.010
Biotechnology20492148Quality attributes and microbial storage stability of caviar from cultivated white sturgeon (Acipenser transmontanus).Shin JH, Oliveira AC, Rasco BAJ Food Sci2010Animals, Fatty Acids/analysis, Fatty Acids, Unsaturated/analysis, Female, Fish Products/*analysis/microbiology/standards, Fishes, Food Handling, Food Microbiology, Food Preservation, Listeria monocytogenes/growth & development, Ovum/chemistry, Salts/analysis10.1111/j.1750-3841.2009.01409.x
Biotechnology23290244Microbiological investigation of Raphanus sativus L. grown hydroponically in nutrient solutions contaminated with spoilage and pathogenic bacteria.Settanni L, Miceli A, Francesca N, Cruciata M, Moschetti GInt J Food Microbiol2012Bacteria/growth & development/isolation & purification, Bacterial Load, *Bacterial Physiological Phenomena, *Food Microbiology, Hydroponics/*standards, Microbial Viability, Random Amplified Polymorphic DNA Technique, Raphanus/growth & development/*microbiologyEnzymology10.1016/j.ijfoodmicro.2012.11.011
Phylogeny28515656Isolation and Characterization of Listeria phages for Control of Growth of Listeria monocytogenes in Milk.Lee S, Kim MG, Lee HS, Heo S, Kwon M, Kim GKorean J Food Sci Anim Resour201710.5851/kosfa.2017.37.2.320
30564023Sterilization protocol for porous dental implants made by Selective Laser Melting.Manea A, Bran S, Baciut M, Armencea G, Pop D, Berce P, Vodnar DC, Hedesiu M, Dinu C, Petrutiu A, Tomina D, Baciut GClujul Med201810.15386/cjmed-987
31091629Influence of Altered Fatty Acid Composition on Resistance of Listeria monocytogenes to Antimicrobials.Juneja VK, Davidson PMJ Food Prot199310.4315/0362-028X-56.4.302
Biotechnology32144691Bacteriocin-like inhibitory substance of Pediococcus pentosaceus as a biopreservative for Listeria sp. control in ready-to-eat pork ham.de Azevedo POS, Mendonca CMN, Seibert L, Dominguez JM, Converti A, Gierus M, Oliveira RPSBraz J Microbiol2020Animals, Anti-Bacterial Agents/*pharmacology, Bacteriocins/*pharmacology, Colony Count, Microbial, Food Microbiology, Food Preservatives/*pharmacology, Food Storage, Listeria/*drug effects/growth & development, Nisin/pharmacology, Pediococcus pentosaceus/*metabolism, Pork Meat/analysis/*microbiologyPathogenicity10.1007/s42770-020-00245-w
34576857Behaviour of Listeria monocytogenes and Natural Microflora during the Manufacture of Riojano Chorizo (Spanish Dry Cured Sausage).Gonzalez-Fandos E, Vazquez de Castro M, Martinez-Laorden AMicroorganisms202110.3390/microorganisms9091963

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
35185Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105457Collection of Institut Pasteur (CIP 105457)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
93179Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID14416.1
121129Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2060.88Collection of Institut Pasteur (CIP 60.88)
124043Isabel Schober, Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy
125438Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg OvermannPredicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets10.1101/2024.08.12.607695
125439Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardydeepG: Deep Learning for Genome Sequence Data. R package version 0.3.1https://github.com/GenomeNet/deepG