Strain identifier

BacDive ID: 135742

Type strain: No

Species: Thermoanaerobacter mathranii subsp. alimentarius

Strain history: CIP <- 2003, J.P. Carlier, Inst. Pasteur, Paris, France: strain AIP 431-03

NCBI tax ID(s): 291615 (subspecies)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 9.2 (current version):
version 9:
version 8.1:
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 9.2 (current version)

General

@ref: 34952

BacDive-ID: 135742

keywords: Bacteria, anaerobe, thermophilic, Gram-negative, rod-shaped

description: Thermoanaerobacter mathranii subsp. alimentarius CIP 108191 is an anaerobe, thermophilic, Gram-negative bacterium of the family Thermoanaerobacteraceae.

NCBI tax id

  • NCBI tax id: 291615
  • Matching level: subspecies

strain history

  • @ref: 34952
  • history: CIP <- 2003, J.P. Carlier, Inst. Pasteur, Paris, France: strain AIP 431-03

doi: 10.13145/bacdive135742.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Thermoanaerobacterales
  • family: Thermoanaerobacteraceae
  • genus: Thermoanaerobacter
  • species: Thermoanaerobacter mathranii subsp. alimentarius
  • full scientific name: Thermoanaerobacter mathranii subsp. alimentarius Carlier et al. 2007

@ref: 34952

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Thermoanaerobacterales

family: Thermoanaerobacteraceae

genus: Thermoanaerobacter

species: Thermoanaerobacter mathranii subsp. alimentarius

type strain: no

Morphology

cell morphology

  • @ref: 34952
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 34952

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
34952MEDIUM 20 - for Anaerobic bacteriayesAgar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
34952CIP Medium 20yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=20

culture temp

  • @ref: 34952
  • growth: positive
  • type: growth
  • temperature: 50

Physiology and metabolism

oxygen tolerance

  • @ref: 34952
  • oxygen tolerance: anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3495217108D-arabinose+degradation
3495215824D-fructose+degradation
3495217634D-glucose-degradation
3495265327D-xylose+degradation
3495217057cellobiose-degradation
3495217716lactose+/-degradation
3495217306maltose-degradation
3495217814salicin+/-degradation
3495217992sucrose-degradation
349524853esculin+hydrolysis
3495217632nitrate-reduction
3495216301nitrite-reduction
3495217632nitrate+respiration

metabolite production

  • @ref: 34952
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase-3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase-3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)-
68382esterase (C 4)+
68382alkaline phosphatase-3.1.3.1
34952oxidase-
34952beta-galactosidase+3.2.1.23
34952gelatinase-
34952amylase-
34952DNase-
34952caseinase-3.4.21.50
34952catalase-1.11.1.6
34952urease-3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58610C16:0316
    58610C13:0 iso2.112.612
    58610C14:0 ISO 3OH14.515.117
    58610C15:0 ANTEISO2.414.711
    58610C15:0 ISO4714.621
    58610C16:3 ω4,7,10c0.915.58
    58610C17:0 iso4.616.629
    58610C17:1 ω5c ISO1.716.461
    58610Unidentified2.613.555
    58610Unidentified1.913.985
    58610Unidentified12.214.17
    58610Unidentified0.916.191
    58610Unidentified0.717.192
    58610unknown 17.1055.417.105
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
34952--+--------+-+--+---

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typesampling dateisolation date
34952ParisFranceFRAEurope
58610ParisFranceFRAEuropeFermented milk2003
34952ParisFranceFRAEuropeFood, Fermented milk2003

isolation source categories

Cat1Cat2Cat3
#Engineered#Food production#Dairy product
#Host Body Product#Fluids#Milk

Safety information

risk assessment

  • @ref: 34952
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 34952

culture collection no.: CIP 108191, CCUG 49567, AIP 431-03

straininfo link

  • @ref: 93033
  • straininfo: 214722

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
34952Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20108191Collection of Institut Pasteur (CIP 108191)
58610Curators of the CCUGhttps://www.ccug.se/strain?id=49567Culture Collection University of Gothenburg (CCUG) (CCUG 49567)
68382Automatically annotated from API zym
93033Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214722.1