Strain identifier

BacDive ID: 135632

Type strain: No

Species: Aeromonas salmonicida

Strain history: CIP <- 1963, NCIMB <- 1960, W.H. Ewing, CDC: strain RH 39 <- S.F. Snieszko

NCBI tax ID(s): 645 (species)

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General

@ref: 34808

BacDive-ID: 135632

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, rod-shaped

description: Aeromonas salmonicida CIP 63.4 is a facultative anaerobe, mesophilic, Gram-negative bacterium that was isolated from Diseased brook trout.

NCBI tax id

  • NCBI tax id: 645
  • Matching level: species

strain history

  • @ref: 34808
  • history: CIP <- 1963, NCIMB <- 1960, W.H. Ewing, CDC: strain RH 39 <- S.F. Snieszko

doi: 10.13145/bacdive135632.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas salmonicida
  • full scientific name: Aeromonas salmonicida (Lehmann and Neumann 1896) Griffin et al. 1953 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Bacterium salmonicida

@ref: 34808

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas salmonicida

type strain: no

Morphology

cell morphology

  • @ref: 34808
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
34808MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
34808CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
34808positivegrowth30mesophilic
34808positivegrowth10-30
34808nogrowth5psychrophilic
34808nogrowth37mesophilic
34808nogrowth41thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 34808
  • oxygen tolerance: facultative anaerobe

halophily

@refsaltgrowthtested relationconcentration
34808NaClpositivegrowth0-2 %
34808NaClnogrowth4 %
34808NaClnogrowth6 %
34808NaClnogrowth8 %
34808NaClnogrowth10 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate+builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose+builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen+builds acid from28087
68371starch+builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose+builds acid from27082
68371sucrose-builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose+builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin+builds acid from4853
68371arbutin+builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine+builds acid from59640
68371methyl alpha-D-glucopyranoside+builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol+builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose+builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
34808mannitol+fermentation29864
34808citrate-carbon source16947
34808esculin+hydrolysis4853
34808glucose+fermentation17234
34808lactose-fermentation17716
34808nitrate+reduction17632
34808nitrite-reduction16301
34808sodium thiosulfate-builds gas from132112
34808glucose+degradation17234
34808nitrate+respiration17632

antibiotic resistance

  • @ref: 34808
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 34808
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3480815688acetoin-
3480817234glucose+

enzymes

@refvalueactivityec
34808oxidase+
34808beta-galactosidase-3.2.1.23
34808alcohol dehydrogenase-1.1.1.1
34808gelatinase+/-
34808amylase+
34808DNase+
34808caseinase+3.4.21.50
34808catalase+1.11.1.6
34808tween esterase+
34808lecithinase+
34808lipase+
34808lysine decarboxylase-4.1.1.18
34808ornithine decarboxylase-4.1.1.17
34808phenylalanine ammonia-lyase-4.3.1.24
34808protease+
34808tryptophan deaminase-
34808urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
34808-+++++----++---+++--

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
34808+/----+----+++-----+--++-++--+---+---++--+------+--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
34808++++-----++-------++--+--------+-+-------+-------+---------++---------------+-+++-----+--++--++----

Isolation, sampling and environmental information

isolation

@refsample type
44490Diseased brook trout
34808Animal, Fish, trout

isolation source categories

Cat1Cat2Cat3
#Host#Fishes#Salmonidae
#Infection#Disease

Safety information

risk assessment

  • @ref: 34808
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 34808

culture collection no.: CIP 63.4, ATCC 14174, NCIMB 833, CCUG 2116, RH 39

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny8309354Cloning and characterization of three hemolysin genes from Aeromonas salmonicida.Hirono I, Aoki TMicrob Pathog10.1006/mpat.1993.10771993Aeromonas/*genetics, Amino Acid Sequence, Animals, Base Composition, Base Sequence, Blotting, Western, Cloning, Molecular, Codon, Conserved Sequence, *Genes, Bacterial, Hemolysin Proteins/*genetics, Hemolysis, Molecular Sequence Data, Nucleic Acid Hybridization, Restriction Mapping, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Species Specificity, VertebratesEnzymology
Phenotype10950178Grouping by plasmid profiles of atypical Aeromonas salmonicida isolated from fish, with special reference to salmonid fish.Sorum H, Holstad G, Lunder T, Hastein TDis Aquat Organ10.3354/dao0411592000Aeromonas/genetics/*isolation & purification, Animals, Female, Fish Diseases/*microbiology, Gram-Negative Bacterial Infections/*microbiology, Male, Norway, Phenotype, Plasmids/*chemistry, SalmonidaeEnzymology

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
34808Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2063.4Collection of Institut Pasteur (CIP 63.4)
44490Curators of the CCUGhttps://www.ccug.se/strain?id=2116Culture Collection University of Gothenburg (CCUG) (CCUG 2116)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym