Strain identifier

BacDive ID: 135587

Type strain: No

Species: Kocuria rosea

Strain history: CIP <- 1956, Brisou, Inst. Pasteur, Paris, France: strain: R27, Micrococcus roseus

NCBI tax ID(s): 1275 (species)

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General

@ref: 34760

BacDive-ID: 135587

keywords: Bacteria, obligate aerobe, mesophilic, Gram-positive, coccus-shaped

description: Kocuria rosea CIP 56.93 is an obligate aerobe, mesophilic, Gram-positive bacterium that was isolated from Unknown source.

NCBI tax id

  • NCBI tax id: 1275
  • Matching level: species

strain history

@refhistory
347601956, Brisou, Inst. Pasteur, Paris, France: strain: R27, Micrococcus roseus
34760CIP <- 1956, Brisou, Inst. Pasteur, Paris, France: strain: R27, Micrococcus roseus

doi: 10.13145/bacdive135587.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Kocuria
  • species: Kocuria rosea
  • full scientific name: Kocuria rosea (Flügge 1886) Stackebrandt et al. 1995

  • synonyms

    @refsynonym
    20215Kocuria erythromyxa
    20215Deinococcus erythromyxa
    20215Micrococcus roseus
    20215Pelczaria aurantia

@ref: 34760

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Kocuria

species: Kocuria rosea

type strain: no

Morphology

cell morphology

  • @ref: 34760
  • gram stain: positive
  • cell shape: coccus-shaped
  • motility: no

colony morphology

  • @ref: 34760

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
34760MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
34760CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
34760positivegrowth30mesophilic
34760positivegrowth10-30
34760nogrowth37mesophilic
34760nogrowth41thermophilic
34760nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 34760
  • oxygen tolerance: obligate aerobe

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose-builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-sorbose-builds acid from17266
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-ribose-builds acid from16988
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
34760hippurate+hydrolysis606565
34760nitrate-reduction17632
34760nitrite-reduction16301

metabolite production

  • @ref: 34760
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 34760
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
34760oxidase-
34760beta-galactosidase+3.2.1.23
34760alcohol dehydrogenase-1.1.1.1
34760gelatinase-
34760amylase+
34760DNase-
34760caseinase-3.4.21.50
34760catalase+1.11.1.6
34760coagulase-
34760tween esterase-
34760gamma-glutamyltransferase-2.3.2.2
34760lecithinase-
34760lipase-
34760lysine decarboxylase-4.1.1.18
34760ornithine decarboxylase-4.1.1.17
34760phenylalanine ammonia-lyase-4.3.1.24
34760protease-
34760urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
34760---+-+++---++--+----

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
34760+/---+/--+/----+/-+/-+/-+/--+/---+/-------------+/---------+/-------+/---

Isolation, sampling and environmental information

isolation

  • @ref: 34760
  • sample type: Unknown source
  • country: France
  • origin.country: FRA
  • continent: Europe

Safety information

risk assessment

  • @ref: 34760
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 34760

culture collection no.: CIP 56.93

straininfo link

  • @ref: 92914
  • straininfo: 68979

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
34760Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2056.93Collection of Institut Pasteur (CIP 56.93)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
92914Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID68979.1