Strain identifier

BacDive ID: 135475

Type strain: No

Species: Lactobacillus crispatus

Strain Designation: F3

Strain history: CIP <- 1996, JCM <- T. Fujisawa: strain F3

NCBI tax ID(s): 47770 (species)

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General

@ref: 34602

BacDive-ID: 135475

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-positive, rod-shaped

description: Lactobacillus crispatus F3 is a facultative anaerobe, mesophilic, Gram-positive bacterium that was isolated from Chicken feces.

NCBI tax id

  • NCBI tax id: 47770
  • Matching level: species

strain history

@refhistory
67770T. Fujisawa F3.
34602CIP <- 1996, JCM <- T. Fujisawa: strain F3

doi: 10.13145/bacdive135475.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Lactobacillus
  • species: Lactobacillus crispatus
  • full scientific name: Lactobacillus crispatus (Brygoo and Aladame 1953) Moore and Holdeman 1970 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Eubacterium crispatum

@ref: 34602

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Lactobacillus

species: Lactobacillus crispatus

strain designation: F3

type strain: no

Morphology

cell morphology

  • @ref: 34602
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
34602MEDIUM 40- for Lactobacillus and LeuconostocyesDistilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
34602CIP Medium 40yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=40

culture temp

@refgrowthtypetemperaturerange
34602positivegrowth37mesophilic
67770positivegrowth37mesophilic
34602positivegrowth30-45
34602nogrowth10psychrophilic
34602nogrowth15psychrophilic
34602nogrowth22psychrophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 34602
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3460217632nitrate-reduction
3460216301nitrite-reduction
3460217632nitrate+respiration

metabolite tests

  • @ref: 34602
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
34602oxidase-
34602alcohol dehydrogenase-1.1.1.1
34602catalase-1.11.1.6
34602lysine decarboxylase-4.1.1.18
34602ornithine decarboxylase-4.1.1.17
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
34602-----+----++++--+---

Isolation, sampling and environmental information

isolation

@refsample type
67770Chicken feces
34602Chicken, feces

Safety information

risk assessment

  • @ref: 34602
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

GC content

  • @ref: 67770
  • GC-content: 35.1
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 34602

culture collection no.: CIP 105003, JCM 8780, LMG 18201

straininfo link

  • @ref: 92832
  • straininfo: 11445

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
34602Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105003Collection of Institut Pasteur (CIP 105003)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68382Automatically annotated from API zym
92832Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID11445.1