Strain identifier

BacDive ID: 135395

Type strain: No

Species: Campylobacter pylori

Strain Designation: N6

Strain history: CIP <- 1994, A. Labigne, Inst. Pasteur, Paris, France: strain N6 <- C. Freland and H.B. Drugeon

NCBI tax ID(s): 210 (species)

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General

@ref: 34504

BacDive-ID: 135395

keywords: Bacteria, mesophilic, Gram-negative, motile, rod-shaped

description: Campylobacter pylori N6 is a mesophilic, Gram-negative, motile bacterium of the family Campylobacteraceae.

NCBI tax id

  • NCBI tax id: 210
  • Matching level: species

strain history

  • @ref: 34504
  • history: CIP <- 1994, A. Labigne, Inst. Pasteur, Paris, France: strain N6 <- C. Freland and H.B. Drugeon

doi: 10.13145/bacdive135395.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Campylobacteraceae
  • genus: Campylobacter
  • species: Campylobacter pylori
  • full scientific name: Campylobacter pylori corrig. Marshall et al. 1985

  • synonyms

    @refsynonym
    20215Campylobacter pyloridis
    20215Helicobacter pylori
    20215Helicobacter nemestrinae

@ref: 34504

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Helicobacteraceae

genus: Helicobacter

species: Helicobacter pylori

strain designation: N6

type strain: no

Morphology

cell morphology

  • @ref: 34504
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 34504

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
34504MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
34504Brucella brothyes
34504CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6
34504CIP Medium 45yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=45

culture temp

@refgrowthtypetemperaturerange
34504positivegrowth37mesophilic
34504nogrowth5psychrophilic
34504nogrowth10psychrophilic
34504nogrowth25mesophilic
34504nogrowth41thermophilic

Physiology and metabolism

halophily

  • @ref: 34504
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 3.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
34504606565hippurate-hydrolysis
3450417632nitrate-reduction
3450416301nitrite-reduction

metabolite production

  • @ref: 34504
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
34504oxidase+
34504gelatinase-
34504DNase-
34504catalase+1.11.1.6
34504urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
34504-+++------++---+----

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample type
34504NantesFranceFRAEurope
34504NantesFranceFRAEuropeHuman, Gastric mucosa

Safety information

risk assessment

  • @ref: 34504
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 34504

culture collection no.: CIP 104085, JCM 12094

straininfo link

  • @ref: 92762
  • straininfo: 68846

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
34504Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104085Collection of Institut Pasteur (CIP 104085)
68382Automatically annotated from API zym
92762Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID68846.1