Strain identifier
version 7.1 (current version)
General
@ref: 34133
BacDive-ID: 135168
keywords: genome sequence, Bacteria, mesophilic
description: Pseudomonas aeruginosa CIP 59.44 is a mesophilic bacterium of the family Pseudomonadaceae.
NCBI tax id
- NCBI tax id: 287
- Matching level: species
doi: 10.13145/bacdive135168.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas aeruginosa
- full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacterium aeruginosum
@ref: 34133
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas aeruginosa
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | yes | 95.629 | |
| 69480 | 99.138 | negative |
Culture and growth conditions
culture medium
- @ref: 34133
- name: MEDIUM 3 - Columbia agar
- growth: yes
- composition: Columbia agar (39.000 g);distilled water (1000.000 ml)
culture temp
- @ref: 34133
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: no
- confidence: 94.977
halophily
- @ref: 69480
- halophily level: non-halophilic
- confidence: 93.486
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Pseudomonas aeruginosa NCTC11450 | GCA_900455165 | contig | ncbi | 287 |
| 66792 | Pseudomonas aeruginosa ATCC 33358 | GCA_001444955 | scaffold | ncbi | 287 |
| 66792 | Pseudomonas aeruginosa strain ATCC 33358 | 287.1992 | wgs | patric | 287 |
| 66792 | Pseudomonas aeruginosa strain NCTC11450 | 287.9412 | wgs | patric | 287 |
| 66792 | Pseudomonas aeruginosa ATCC 33358 | 2660238005 | draft | img | 287 |
| 66792 | Mycobacterium tuberculosis T85 T85 | GCA_000665885 | scaffold | patric | 520141 |
| 66792 | Staphylococcus aureus EOE143 | GCA_900483035 | contig | patric | 1280 |
External links
@ref: 34133
culture collection no.: CIP 59.44, ATCC 33358, NCTC 11450
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/234522 |
| 20218 | http://www.straininfo.net/strains/32364 |
| 20218 | http://www.straininfo.net/strains/32368 |
literature
- topic: Genetics
- Pubmed-ID: 7511985
- title: Analysis by the reductive-cleavage method of a polysaccharide containing 2-acetamido-2,6-dideoxy-D- and -L-galactopyranosyl residues.
- authors: D'Ambra AJ, Gray GR
- journal: Carbohydr Res
- DOI: 10.1016/0008-6215(94)84281-7
- year: 1994
- mesh: Benzoates/chemistry, Butanols/chemistry, Carbohydrate Sequence, Fucose/*analogs & derivatives/analysis, Magnetic Resonance Spectroscopy, Methanol/chemistry, Methylation, Molecular Sequence Data, O Antigens, Oxidation-Reduction, Polysaccharides, Bacterial/*chemistry/isolation & purification, Protons, Pseudomonas aeruginosa/*chemistry
- topic2: Enzymology
Reference
| @id | authors | title | doi/url | journal | pubmed | catalogue |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | StrainInfo introduces electronic passports for microorganisms. | 10.1016/j.syapm.2013.11.002 | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 34133 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/9787 | Collection of Institut Pasteur (CIP 59.44) | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |