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Strain identifier

BacDive ID: 135116

Type strain: No

Species: Campylobacter pylori

Strain history: CIP 104086 <-- A. Labigne 85P <-- J. L. Fauchère.

NCBI tax ID(s): 210 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 34037

BacDive-ID: 135116

keywords: 16S sequence, Bacteria, mesophilic

description: Campylobacter pylori CIP 104086 is a mesophilic bacterium of the family Campylobacteraceae.

NCBI tax id

  • NCBI tax id: 210
  • Matching level: species

strain history: CIP 104086 <-- A. Labigne 85P <-- J. L. Fauchère.

doi: 10.13145/bacdive135116.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Campylobacteraceae
  • genus: Campylobacter
  • species: Campylobacter pylori
  • full scientific name: Campylobacter pylori corrig. Marshall et al. 1985
  • synonyms

    @refsynonym
    20215Campylobacter pyloridis
    20215Helicobacter pylori
    20215Helicobacter nemestrinae

@ref: 34037

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Helicobacteraceae

genus: Helicobacter

species: Helicobacter pylori

type strain: no

Culture and growth conditions

culture medium

  • @ref: 34037
  • name: MEDIUM 45 - for Columbia agar with sheep blood
  • growth: yes
  • composition: Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml)

culture temp

@refgrowthtypetemperaturerange
34037positivegrowth37mesophilic
67770positivegrowth37mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 34037
  • geographic location: Paris
  • country: France
  • origin.country: FRA
  • continent: Europe

taxonmaps

  • @ref: 69479
  • File name: preview.99_91.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_36;96_72;97_75;98_82;99_91&stattab=map
  • Last taxonomy: Helicobacter pylori subclade
  • 16S sequence: LC507448
  • Sequence Identity:
  • Total samples: 18084
  • soil counts: 670
  • aquatic counts: 829
  • animal counts: 16307
  • plant counts: 278

Sequence information

16S sequences

  • @ref: 67770
  • description: Helicobacter pylori JCM 12095 gene for 16S ribosomal RNA, partial sequence
  • accession: LC507448
  • length: 1426
  • database: ena
  • NCBI tax ID: 210

External links

@ref: 34037

culture collection no.: CIP 104086, JCM 12095

straininfo link

@refpassport
20218http://www.straininfo.net/strains/151667
20218http://www.straininfo.net/strains/403880

Reference

@idauthorstitledoi/urljournalpubmedcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.StrainInfo introduces electronic passports for microorganisms.10.1016/j.syapm.2013.11.002Syst Appl Microbiol. 37: 42-50 201424321274
34037Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15954 Collection of Institut Pasteur (CIP 104086)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/