Strain identifier
BacDive ID: 135116
Type strain: 
Species: Campylobacter pylori
Strain history: CIP 104086 <-- A. Labigne 85P <-- J. L. Fauchère.
NCBI tax ID(s): 210 (species)
version 7.1 (current version)
General
@ref: 34037
BacDive-ID: 135116
keywords: 16S sequence, Bacteria, mesophilic
description: Campylobacter pylori CIP 104086 is a mesophilic bacterium of the family Campylobacteraceae.
NCBI tax id
- NCBI tax id: 210
- Matching level: species
strain history: CIP 104086 <-- A. Labigne 85P <-- J. L. Fauchère.
doi: 10.13145/bacdive135116.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Epsilonproteobacteria
- order: Campylobacterales
- family: Campylobacteraceae
- genus: Campylobacter
- species: Campylobacter pylori
- full scientific name: Campylobacter pylori corrig. Marshall et al. 1985
synonyms
@ref synonym 20215 Campylobacter pyloridis 20215 Helicobacter pylori 20215 Helicobacter nemestrinae
@ref: 34037
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Helicobacteraceae
genus: Helicobacter
species: Helicobacter pylori
type strain: no
Culture and growth conditions
culture medium
- @ref: 34037
- name: MEDIUM 45 - for Columbia agar with sheep blood
- growth: yes
- composition: Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml)
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 34037 | positive | growth | 37 | mesophilic |
| 67770 | positive | growth | 37 | mesophilic |
Isolation, sampling and environmental information
isolation
- @ref: 34037
- geographic location: Paris
- country: France
- origin.country: FRA
- continent: Europe
taxonmaps
- @ref: 69479
- File name: preview.99_91.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_36;96_72;97_75;98_82;99_91&stattab=map
- Last taxonomy: Helicobacter pylori subclade
- 16S sequence: LC507448
- Sequence Identity:
- Total samples: 18084
- soil counts: 670
- aquatic counts: 829
- animal counts: 16307
- plant counts: 278
Sequence information
16S sequences
- @ref: 67770
- description: Helicobacter pylori JCM 12095 gene for 16S ribosomal RNA, partial sequence
- accession: LC507448
- length: 1426
- database: ena
- NCBI tax ID: 210
External links
@ref: 34037
culture collection no.: CIP 104086, JCM 12095
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/151667 |
| 20218 | http://www.straininfo.net/strains/403880 |
Reference
| @id | authors | title | doi/url | journal | pubmed | catalogue |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | StrainInfo introduces electronic passports for microorganisms. | 10.1016/j.syapm.2013.11.002 | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 34037 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/15954 | Collection of Institut Pasteur (CIP 104086) | |||
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |