Strain identifier
BacDive ID: 134915
Type strain:
Species: Acinetobacter kyonggiensis
Strain Designation: KSL5401-037
Strain history: CIP <- 2013, JCM <- 2010, SS. Lee, Kyonggi Univ., Suwon, Korea: strain KSL5401-037
NCBI tax ID(s): 595670 (species)
General
@ref: 65186
BacDive-ID: 134915
keywords: 16S sequence, Bacteria, aerobe, mesophilic
description: Acinetobacter kyonggiensis KSL5401-037 is an aerobe, mesophilic bacterium that was isolated from Sewage treatment plant.
NCBI tax id
- NCBI tax id: 595670
- Matching level: species
strain history
@ref | history |
---|---|
67770 | H. Matsuyama; Tokai Univ., Japan; 9a2. |
67770 | S.-S. Lee KSL5401-037. |
67771 | <- Wonduck Kim, KIOST |
33582 | CIP <- 2013, JCM <- 2010, SS. Lee, Kyonggi Univ., Suwon, Korea: strain KSL5401-037 |
doi: 10.13145/bacdive134915.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Acinetobacter
- species: Acinetobacter kyonggiensis
- full scientific name: Acinetobacter kyonggiensis Lee and Lee 2010
@ref: 65186
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Acinetobacter
species: Acinetobacter kyonggiensis
strain designation: KSL5401-037
type strain: yes
Culture and growth conditions
culture medium
@ref | name | growth | composition | link |
---|---|---|---|---|
33582 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
33582 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
33582 | positive | growth | 30 | mesophilic |
63654 | positive | growth | 30 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 63654
- oxygen tolerance: aerobe
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | - | assimilation |
68369 | 27689 | decanoate | - | assimilation |
68369 | 24265 | gluconate | - | assimilation |
68369 | 17306 | maltose | - | assimilation |
68369 | 59640 | N-acetylglucosamine | - | assimilation |
68369 | 16899 | D-mannitol | - | assimilation |
68369 | 16024 | D-mannose | - | assimilation |
68369 | 30849 | L-arabinose | - | assimilation |
68369 | 17634 | D-glucose | - | assimilation |
68369 | 5291 | gelatin | - | hydrolysis |
68369 | 4853 | esculin | - | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | - | hydrolysis |
68369 | 17634 | D-glucose | - | fermentation |
68369 | 27897 | tryptophan | - | energy source |
68369 | 17632 | nitrate | - | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68369 | cytochrome oxidase | - | 1.9.3.1 |
68369 | gelatinase | - | |
68369 | beta-glucosidase | - | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
63654 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent |
---|---|---|---|---|---|
63654 | Sewage treatment plant | Gwangju,Gyeonggi-do | Republic of Korea | KOR | Asia |
67770 | Sewage treatment plant in Gwangju | Republic of Korea | KOR | Asia | |
33582 | Environment, Sewage treatment plant | Gwangju | Republic of Korea | KOR | Asia |
isolation source categories
- Cat1: #Engineered
- Cat2: #Waste
- Cat3: #Water treatment plant
Safety information
risk assessment
- @ref: 33582
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
67770 | Acinetobacter kyonggiensis strain KSL5401-037 16S ribosomal RNA gene, partial sequence | FJ527818 | 1395 | ena | 595670 |
67770 | Acinetobacter kyonggiensis JCM 17071 gene for 16S ribosomal RNA, partial sequence | LC508807 | 1462 | ena | 595670 |
GC content
- @ref: 67770
- GC-content: 41.2-42.1
- method: high performance liquid chromatography (HPLC)
External links
@ref: 65186
culture collection no.: CIP 110605, JCM 17071, KEMC 5401-037, CCUG 69704
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 21221930 | Acinetobacter kyonggiensis sp. nov., a beta-glucosidase-producing bacterium, isolated from sewage treatment plant. | Lee HJ, Lee SS | J Microbiol | 10.1007/s12275-010-0355-8 | 2011 | Acinetobacter/chemistry/*enzymology/genetics/*isolation & purification, Base Composition, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, Sewage/*microbiology, Ubiquinone/analysis, Water Purification, beta-Glucosidase/*metabolism | Enzymology |
Phylogeny | 31038448 | Anaerosacchariphilus polymeriproducens gen. nov., sp. nov., an anaerobic bacterium isolated from a salt field. | Kim W, Yang SH, Park MJ, Oh J, Lee JH, Kwon KK | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003404 | 2019 | Bacterial Typing Techniques, Base Composition, Clostridiales/*classification/isolation & purification, DNA, Bacterial/genetics, Fatty Acids/chemistry, Geologic Sediments/*microbiology, Phospholipids/chemistry, *Phylogeny, Ponds, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, *Sodium Chloride | Transcriptome |
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
33582 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110605 | Collection of Institut Pasteur (CIP 110605) | |
63654 | Curators of the CCUG | https://www.ccug.se/strain?id=69704 | Culture Collection University of Gothenburg (CCUG) (CCUG 69704) | |
65186 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-105757 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 105757) | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
67771 | Curators of the KCTC | https://kctc.kribb.re.kr/En/Kctc | ||
68369 | Automatically annotated from API 20NE |