Strain identifier

BacDive ID: 134908

Type strain: No

Species: Pseudomonas oryzihabitans

Strain Designation: 739-86

Strain history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 739-86 <- Bayonne Hosp., Bayonne, France

NCBI tax ID(s): 47885 (species)

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General

@ref: 33573

BacDive-ID: 134908

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, ovoid-shaped

description: Pseudomonas oryzihabitans 739-86 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Pseudomonadaceae.

NCBI tax id

  • NCBI tax id: 47885
  • Matching level: species

strain history

  • @ref: 33573
  • history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 739-86 <- Bayonne Hosp., Bayonne, France

doi: 10.13145/bacdive134908.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas oryzihabitans
  • full scientific name: Pseudomonas oryzihabitans Kodama et al. 1985

  • synonyms

    @refsynonym
    20215Pseudomonas psychrotolerans
    20215Flavimonas oryzihabitans

@ref: 33573

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas oryzihabitans

strain designation: 739-86

type strain: no

Morphology

cell morphology

  • @ref: 33573
  • gram stain: negative
  • cell shape: ovoid-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
33573MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
33573CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3
33573CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

  • @ref: 33573
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 33573
  • oxygen tolerance: obligate aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3357317632nitrate-reduction
3357316301nitrite-reduction

metabolite production

  • @ref: 33573
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
33573oxidase-
33573catalase+1.11.1.6
33573urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
33573--++-++-+-+---------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
33573BayonneFranceFRAEurope
33573BayonneFranceFRAEuropeHuman, Abdominal pus1986

Safety information

risk assessment

  • @ref: 33573
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 33573

culture collection no.: CIP 102739

straininfo link

  • @ref: 92344
  • straininfo: 69813

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
33573Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102739Collection of Institut Pasteur (CIP 102739)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68382Automatically annotated from API zym
92344Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID69813.1