Strain identifier
BacDive ID: 134711
Type strain:
Species: Chryseobacterium aquaticum subsp. greenlandense
Strain history: CIP <- 2009, J. Loveland-Curtze, Pennsylvania State Univ., Pennsylvania, USA: strain UMB34, "Chryseobacterium greenlandensis"
NCBI tax ID(s): 345663 (subspecies)
General
@ref: 33344
BacDive-ID: 134711
keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, rod-shaped
description: Chryseobacterium aquaticum subsp. greenlandense CIP 110007 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Weeksellaceae.
NCBI tax id
- NCBI tax id: 345663
- Matching level: subspecies
strain history
- @ref: 33344
- history: CIP <- 2009, J. Loveland-Curtze, Pennsylvania State Univ., Pennsylvania, USA: strain UMB34, "Chryseobacterium greenlandensis"
doi: 10.13145/bacdive134711.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Weeksellaceae
- genus: Chryseobacterium
- species: Chryseobacterium aquaticum subsp. greenlandense
- full scientific name: Chryseobacterium aquaticum subsp. greenlandense (Loveland-Curtze et al. 2010) García-López et al. 2020
synonyms
- @ref: 20215
- synonym: Chryseobacterium greenlandense
@ref: 33344
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Chryseobacterium
species: Chryseobacterium greenlandense
type strain: yes
Morphology
cell morphology
- @ref: 33344
- gram stain: negative
- cell shape: rod-shaped
- motility: no
Culture and growth conditions
culture medium
@ref | name | growth | composition | link |
---|---|---|---|---|
33344 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
33344 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
- @ref: 33344
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 33344
- oxygen tolerance: obligate aerobe
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
33344 | 17632 | nitrate | - | reduction |
33344 | 16301 | nitrite | - | reduction |
metabolite production
- @ref: 33344
- Chebi-ID: 35581
- metabolite: indole
- production: no
enzymes
@ref | value | activity | ec |
---|---|---|---|
33344 | oxidase | + | |
33344 | catalase | + | 1.11.1.6 |
33344 | urease | - | 3.5.1.5 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | esterase (C 4) | - | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | + | |
68382 | cystine arylamidase | + | 3.4.11.3 |
68382 | trypsin | + | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
33344 | - | + | - | + | - | + | + | + | + | - | + | + | - | - | - | + | - | + | - | - |
Isolation, sampling and environmental information
isolation
@ref | geographic location | country | origin.country | continent | sample type | isolation date |
---|---|---|---|---|---|---|
33344 | Greenland ice sheet | Greenland | GRL | North America | ||
33344 | Ice Sheet | Greenland | GRL | North America | Environment, Greenland, GIPS2 ice core | 2004 |
Safety information
risk assessment
- @ref: 33344
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
External links
@ref: 33344
culture collection no.: CIP 110007, NRRL B-59357
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
33344 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110007 | Collection of Institut Pasteur (CIP 110007) | |
68382 | Automatically annotated from API zym |