Strain identifier

BacDive ID: 134448

Type strain: No

Species: Acinetobacter parvus

Strain Designation: 2288

Strain history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 56-86, Acinetobacter sp. <- Rennes Hosp., France: strain 2288

NCBI tax ID(s): 134533 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 32769

BacDive-ID: 134448

keywords: genome sequence, Bacteria, obligate aerobe, mesophilic, Gram-negative

description: Acinetobacter parvus 2288 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Moraxellaceae.

NCBI tax id

  • NCBI tax id: 134533
  • Matching level: species

strain history

  • @ref: 32769
  • history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 56-86, Acinetobacter sp. <- Rennes Hosp., France: strain 2288

doi: 10.13145/bacdive134448.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter parvus
  • full scientific name: Acinetobacter parvus Nemec et al. 2003

@ref: 32769

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter parvus

strain designation: 2288

type strain: no

Morphology

cell morphology

@refgram stainconfidencecell shapemotility
69480negative99.946
32769negativerod-shapedno

colony morphology

  • @ref: 32769

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
32769MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
32769CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6
32769CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
32769positivegrowth30mesophilic
32769positivegrowth25-37mesophilic
32769nogrowth10psychrophilic
32769nogrowth41thermophilic
32769nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 32769
  • oxygen tolerance: obligate aerobe

spore formation

@refspore formationconfidence
69481no100
69480no99.951

halophily

@refsaltgrowthtested relationconcentration
32769NaClpositivegrowth0-2 %
32769NaClnogrowth4 %
32769NaClnogrowth6 %
32769NaClnogrowth8 %
32769NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3276916947citrate-carbon source
3276917632nitrate-reduction
3276916301nitrite-reduction
3276917234glucose-degradation
3276917632nitrate-respiration

antibiotic resistance

  • @ref: 32769
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 32769
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3276915688acetoin-
3276917234glucose-

enzymes

@refvalueactivityec
32769oxidase-
32769beta-galactosidase-3.2.1.23
32769gelatinase-
32769catalase+1.11.1.6
32769gamma-glutamyltransferase-2.3.2.2
32769urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
32769--++------++---+----

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
32769---------------------------------------------------------------------------------------------------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
32769RennesFranceFRAEurope
32769RennesFranceFRAEuropeHuman, Sputum1986

Safety information

risk assessment

  • @ref: 32769
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Acinetobacter sp. CIP 102129GCA_000368305scaffoldncbi1144664
66792Acinetobacter sp. CIP 1021291144664.3wgspatric1144664
66792Acinetobacter sp. CIP 1021292565956675draftimg1144664

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno92.144no
flagellatedno96.148no
gram-positiveno97.9no
anaerobicno98.109no
aerobicyes89.268no
halophileno91.496no
spore-formingno96.458no
thermophileno99.764yes
glucose-utilno92.433no
glucose-fermentno93.334no

External links

@ref: 32769

culture collection no.: CIP 102129

straininfo link

  • @ref: 91972
  • straininfo: 67089

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
32769Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102129Collection of Institut Pasteur (CIP 102129)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68382Automatically annotated from API zym
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
91972Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID67089.1