Strain identifier

BacDive ID: 134411

Type strain: No

Species: Streptococcus pyogenes

Strain Designation: Lowe

Strain history: CIP <- 1956, R. Wahl: strain A16 t14, Streptococcus pyogenes Type 14 <- 1950, Williams, Public Hlth. Lab., Colindale, London, UK: strain Lowe <- Griffith

NCBI tax ID(s): 1314 (species)

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General

@ref: 32712

BacDive-ID: 134411

keywords: genome sequence, Bacteria, mesophilic

description: Streptococcus pyogenes Lowe is a mesophilic bacterium that was isolated from Unknown source.

NCBI tax id

  • NCBI tax id: 1314
  • Matching level: species

strain history

  • @ref: 32712
  • history: CIP <- 1956, R. Wahl: strain A16 t14, Streptococcus pyogenes Type 14 <- 1950, Williams, Public Hlth. Lab., Colindale, London, UK: strain Lowe <- Griffith

doi: 10.13145/bacdive134411.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Streptococcaceae
  • genus: Streptococcus
  • species: Streptococcus pyogenes
  • full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)

@ref: 32712

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Streptococcaceae

genus: Streptococcus

species: Streptococcus pyogenes

strain designation: Lowe

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram stain
69480no92.036
69480100positive

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
32712MEDIUM 29- Brain heart agaryesDistilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g)
32712CIP Medium 29yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=29

culture temp

  • @ref: 32712
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

spore formation

@refspore formationconfidence
69481no100
69480no99.993

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838129016arginine+hydrolysis
6838116988D-ribose-builds acid from
6838116899D-mannitol-builds acid from
6838130911sorbitol-builds acid from
6838117716lactose-builds acid from
6838127082trehalose+builds acid from
6838116634raffinose-builds acid from
6838117992sucrose+builds acid from
6838130849L-arabinose-builds acid from
6838118333D-arabitol-builds acid from
6838140585alpha-cyclodextrin-builds acid from
68381606565hippurate-hydrolysis
6838128087glycogen-builds acid from
6838127941pullulan+builds acid from
6838117306maltose+builds acid from
6838128053melibiose-builds acid from
683816731melezitose-builds acid from
68381320055methyl beta-D-glucopyranoside+builds acid from
6838116443D-tagatose-builds acid from
6838116199urea-hydrolysis

metabolite production

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: yes

metabolite tests

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
68381urease-3.5.1.5
68381beta-mannosidase-3.2.1.25
68381glycyl tryptophan arylamidase-
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381pyrrolidonyl arylamidase+3.4.19.3
68381beta-galactosidase-3.2.1.23
68381Alanyl-Phenylalanyl-Proline arylamidase+
68381alkaline phosphatase+3.1.3.1
68381alpha-galactosidase-3.2.1.22
68381beta-glucuronidase-3.2.1.31
68381beta-glucosidase-3.2.1.21
68381arginine dihydrolase+3.5.3.6

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
45806+----+----+-+---++-+----++--+---

Isolation, sampling and environmental information

isolation

  • @ref: 32712
  • sample type: Unknown source

Safety information

risk assessment

  • @ref: 32712
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Streptococcus pyogenes NCTC8199GCA_900459935contigncbi1314
66792Streptococcus pyogenes strain NCTC81991314.813wgspatric1314

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno96.118no
gram-positiveyes91.475no
anaerobicno96.878no
halophileyes85.27no
spore-formingno95.802no
thermophileno99.175no
glucose-utilyes87.901no
flagellatedno98.699no
aerobicno94.176no
glucose-fermentyes80.853no

External links

@ref: 32712

culture collection no.: CCUG 12714, CIP 56.54, IMET 3049, NCTC 8199

straininfo link

  • @ref: 91939
  • straininfo: 57973

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
32712Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2056.54Collection of Institut Pasteur (CIP 56.54)
45806Curators of the CCUGhttps://www.ccug.se/strain?id=12714Culture Collection University of Gothenburg (CCUG) (CCUG 12714)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68381Automatically annotated from API rID32STR
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
91939Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID57973.1