Strain identifier

BacDive ID: 134388

Type strain: No

Species: Serratia bockelmannii

Strain history: CIP <- 2001, F. Grimont, Inst. Pasteur, Paris, France, strain: CDC 6320-58 <- Le Minor <- Ewing, CDC, Atlanta, USA

NCBI tax ID(s): 615 (species)

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General

@ref: 32675

BacDive-ID: 134388

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, rod-shaped

description: Serratia bockelmannii CIP 107241 is a facultative anaerobe, mesophilic, Gram-negative bacterium that was isolated from Unknown source.

NCBI tax id

  • NCBI tax id: 615
  • Matching level: species

strain history

  • @ref: 32675
  • history: CIP <- 2001, F. Grimont, Inst. Pasteur, Paris, France, strain: CDC 6320-58 <- Le Minor <- Ewing, CDC, Atlanta, USA

doi: 10.13145/bacdive134388.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Yersiniaceae
  • genus: Serratia
  • species: Serratia bockelmannii
  • full scientific name: Serratia bockelmannii Cho et al. 2020

@ref: 32675

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Yersiniaceae

genus: Serratia

species: Serratia bockelmannii

type strain: no

Morphology

cell morphology

  • @ref: 32675
  • gram stain: negative
  • cell shape: rod-shaped

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
32675MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
32675CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
32675positivegrowth30mesophilic
32675positivegrowth10-41
32675nogrowth5psychrophilic
32675nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 32675
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3267529864mannitol-fermentation
3267516947citrate+carbon source
3267517234glucose+fermentation
3267517716lactose+fermentation
3267517632nitrate+reduction
3267516301nitrite-reduction
3267515792malonate-assimilation
32675132112sodium thiosulfate-builds gas from

antibiotic resistance

  • @ref: 32675
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 32675
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3267515688acetoin+
3267517234glucose-

enzymes

@refvalueactivityec
32675oxidase-
32675beta-galactosidase+3.2.1.23
32675alcohol dehydrogenase-1.1.1.1
32675gelatinase-
32675catalase+1.11.1.6
32675lysine decarboxylase+4.1.1.18
32675ornithine decarboxylase+4.1.1.17
32675phenylalanine ammonia-lyase-4.3.1.24
32675tryptophan deaminase-
32675urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
32675-+++------++---+++--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
32675+++++--+-++------+++----+--++--+++--++-++------+++++-+++++-++++--++-----++-+++-++-+---+--++++++--+-

Isolation, sampling and environmental information

isolation

  • @ref: 32675
  • sample type: Unknown source

Safety information

risk assessment

  • @ref: 32675
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 32675

culture collection no.: CIP 107241, CDC 6320-58

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
32675Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107241Collection of Institut Pasteur (CIP 107241)
68382Automatically annotated from API zym