Strain identifier
BacDive ID: 134374
Type strain: 
Species: Paenibacillus septentrionalis
Strain Designation: X13-1
NCBI tax ID(s): 429342 (species)
version 8.1 (current version)
General
@ref: 32653
BacDive-ID: 134374
keywords: 16S sequence, Bacteria, facultative anaerobe, spore-forming, Gram-positive, motile, rod-shaped
description: Paenibacillus septentrionalis X13-1 is a facultative anaerobe, spore-forming, Gram-positive bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 429342
- Matching level: species
doi: 10.13145/bacdive134374.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Paenibacillus
- species: Paenibacillus septentrionalis
- full scientific name: Paenibacillus septentrionalis Khianngam et al. 2009
@ref: 32653
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus septentrionalis
strain designation: X13-1
type strain: yes
Morphology
cell morphology
- @ref: 32653
- gram stain: positive
- cell length: 7 µm
- cell width: 0.65 µm
- cell shape: rod-shaped
- motility: yes
Culture and growth conditions
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 32653 | positive | growth | 15-45 | |
| 32653 | positive | optimum | 30 | mesophilic |
culture pH
| @ref | ability | type | pH | PH range |
|---|---|---|---|---|
| 32653 | positive | growth | 07-09 | alkaliphile |
| 32653 | positive | optimum | 8 |
Physiology and metabolism
oxygen tolerance
- @ref: 32653
- oxygen tolerance: facultative anaerobe
spore formation
- @ref: 32653
- spore formation: yes
halophily
| @ref | salt | growth | tested relation | concentration |
|---|---|---|---|---|
| 32653 | NaCl | positive | growth | 03-05 % |
| 32653 | NaCl | positive | optimum | 4 % |
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 32653 | 17234 | glucose | + | carbon source |
| 32653 | 28087 | glycogen | + | carbon source |
| 32653 | 53426 | tween 80 | + | carbon source |
| 32653 | 4853 | esculin | + | hydrolysis |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 32653 | catalase | + | 1.11.1.6 |
| 32653 | urease | + | 3.5.1.5 |
Isolation, sampling and environmental information
isolation
- @ref: 32653
- sample type: soil
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Sequence information
16S sequences
- @ref: 32653
- description: Paenibacillus montaniterrae gene for 16S rRNA, partial sequence
- accession: AB295646
- length: 1466
- database: nuccore
- NCBI tax ID: 429341
GC content
- @ref: 32653
- GC-content: 47.3
External links
@ref: 32653
culture collection no.: KCTC 13039, PCU 280
literature
- topic: Phylogeny
- Pubmed-ID: 19126736
- title: Paenibacillus siamensis sp. nov., Paenibacillus septentrionalis sp. nov. and Paenibacillus montaniterrae sp. nov., xylanase-producing bacteria from Thai soils.
- authors: Khianngam S, Tanasupawat S, Lee JS, Lee KC, Akaracharanya A
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.65851-0
- year: 2009
- mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Genes, rRNA, Gram-Positive Endospore-Forming Rods/*classification/*enzymology/genetics/isolation & purification, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Species Specificity, Thailand, Xylosidases/*biosynthesis
- topic2: Enzymology
Reference
| @id | authors | title | doi/url | ID_cross_reference | pubmed |
|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
| 32653 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 28864 | 28776041 |