Strain identifier
BacDive ID: 134101
Type strain: 
Species: Acetanaerobacterium elongatum
Strain Designation: Z7
NCBI tax ID(s): 258515 (species)
version 8.1 (current version)
General
@ref: 31285
BacDive-ID: 134101
keywords: 16S sequence, Bacteria, anaerobe, Gram-positive, motile, rod-shaped
description: Acetanaerobacterium elongatum Z7 is an anaerobe, Gram-positive, motile bacterium that was isolated from wastewater.
NCBI tax id
- NCBI tax id: 258515
- Matching level: species
doi: 10.13145/bacdive134101.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Oscillospiraceae
- genus: Acetanaerobacterium
- species: Acetanaerobacterium elongatum
- full scientific name: Acetanaerobacterium elongatum Chen and Dong 2004
@ref: 31285
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Ruminococcaceae
genus: Acetanaerobacterium
species: Acetanaerobacterium elongatum
strain designation: Z7
type strain: yes
Morphology
cell morphology
- @ref: 31285
- gram stain: positive
- cell length: 6 µm
- cell width: 0.3 µm
- cell shape: rod-shaped
- motility: yes
Culture and growth conditions
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 31285 | positive | growth | 20-42 | |
| 31285 | positive | optimum | 37 | mesophilic |
culture pH
| @ref | ability | type | pH |
|---|---|---|---|
| 31285 | positive | growth | 5-7.5 |
| 31285 | positive | optimum | 6.75 |
Physiology and metabolism
oxygen tolerance
- @ref: 31285
- oxygen tolerance: anaerobe
spore formation
- @ref: 31285
- spore formation: no
halophily
| @ref | salt | growth | tested relation | concentration |
|---|---|---|---|---|
| 31285 | NaCl | positive | growth | 0-2 % |
| 31285 | NaCl | positive | optimum | 1 % |
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 31285 | 22599 | arabinose | + | carbon source |
| 31285 | 17057 | cellobiose | + | carbon source |
| 31285 | 28757 | fructose | + | carbon source |
| 31285 | 28260 | galactose | + | carbon source |
| 31285 | 17234 | glucose | + | carbon source |
| 31285 | 17306 | maltose | + | carbon source |
| 31285 | 16634 | raffinose | + | carbon source |
| 31285 | 17814 | salicin | + | carbon source |
| 31285 | 17992 | sucrose | + | carbon source |
| 31285 | 18222 | xylose | + | carbon source |
| 31285 | 4853 | esculin | + | hydrolysis |
enzymes
- @ref: 31285
- value: gelatinase
- activity: +
Isolation, sampling and environmental information
isolation
- @ref: 31285
- sample type: wastewater
isolation source categories
- Cat1: #Engineered
- Cat2: #Waste
- Cat3: #Wastewater
taxonmaps
- @ref: 69479
- File name: preview.99_9178.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_154;96_4382;97_5336;98_6746;99_9178&stattab=map
- Last taxonomy: Acetanaerobacterium elongatum subclade
- 16S sequence: AY487928
- Sequence Identity:
- Total samples: 1279
- soil counts: 541
- aquatic counts: 279
- animal counts: 393
- plant counts: 66
Sequence information
16S sequences
- @ref: 31285
- description: Acetanaerobacterium elongatum strain Z7 16S ribosomal RNA gene, complete sequence
- accession: AY487928
- length: 1533
- database: nuccore
- NCBI tax ID: 258515
GC content
- @ref: 31285
- GC-content: 50.4
External links
@ref: 31285
culture collection no.: JCM 12359, AS 1.5012
straininfo link
- @ref: 91708
- straininfo: 134409
literature
- topic: Phylogeny
- Pubmed-ID: 15545467
- title: Acetanaerobacterium elongatum gen. nov., sp. nov., from paper mill waste water.
- authors: Chen S, Dong X
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.63212-0
- year: 2004
- mesh: Acetic Acid/metabolism, Anaerobiosis, Base Composition, Carbohydrate Metabolism, Carbon Dioxide/metabolism, China, DNA, Bacterial/chemistry/isolation & purification, DNA, Ribosomal/chemistry/isolation & purification, Esculin/metabolism, Ethanol/metabolism, Fatty Acids/chemistry/isolation & purification, Fermentation, Gelatin/metabolism, Genes, rRNA, Gentian Violet, Gram-Positive Bacteria/*classification/cytology/*isolation & purification/physiology, Hydrogen/metabolism, Hydrogen-Ion Concentration, Microscopy, Electron, Molecular Sequence Data, Phenazines, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sewage/*microbiology, Spores, Bacterial/cytology, Temperature, *Water Microbiology
- topic2: Metabolism
Reference
| @id | authors | title | doi/url | ID_cross_reference | pubmed | journal |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 31285 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 27604 | 28776041 | |
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | 33211880 | Nucleic Acids Res. 49: D498-D508 2020 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |||
| 91708 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID134409.1 |