Strain identifier

BacDive ID: 134097

Type strain: No

Species: Enterococcus italicus

NCBI tax ID(s): 246144 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 31277

BacDive-ID: 134097

keywords: 16S sequence, Bacteria, Gram-positive, coccus-shaped

description: Enterococcus italicus CCM 7220 is a Gram-positive, coccus-shaped bacterium that was isolated from food product.

NCBI tax id

  • NCBI tax id: 246144
  • Matching level: species

doi: 10.13145/bacdive134097.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Enterococcaceae
  • genus: Enterococcus
  • species: Enterococcus italicus
  • full scientific name: Enterococcus italicus Fortina et al. 2004
  • synonyms

    • @ref: 20215
    • synonym: Enterococcus saccharominimus

@ref: 31277

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Enterococcaceae

genus: Enterococcus

species: Enterococcus italicus

type strain: no

Morphology

cell morphology

  • @ref: 31277
  • gram stain: positive
  • cell shape: coccus-shaped
  • motility: no

Physiology and metabolism

observation

  • @ref: 31277
  • observation: aggregates in clumps

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3127728757fructose+carbon source
3127728260galactose+carbon source
3127717234glucose+carbon source
3127717716lactose+carbon source
3127717306maltose+carbon source
3127737684mannose+carbon source
31277506227N-acetylglucosamine+carbon source
3127717992sucrose+carbon source
312774853esculin+hydrolysis

Isolation, sampling and environmental information

isolation

  • @ref: 31277
  • sample type: food product

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Food production
  • Cat3: #Food

taxonmaps

  • @ref: 69479
  • File name: preview.99_4369.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_13;96_1097;97_1285;98_3282;99_4369&stattab=map
  • Last taxonomy: Enterococcus
  • 16S sequence: AJ626902
  • Sequence Identity:
  • Total samples: 16591
  • soil counts: 493
  • aquatic counts: 2257
  • animal counts: 12994
  • plant counts: 847

Sequence information

16S sequences

  • @ref: 31277
  • description: Enterococcus saccharominimus 16S rRNA gene, type strain LMG 21727T
  • accession: AJ626902
  • length: 1509
  • database: nuccore
  • NCBI tax ID: 246144

GC content

  • @ref: 31277
  • GC-content: 38.5

External links

@ref: 31277

culture collection no.: CCM 7220, LMG 21727

literature

  • topic: Phylogeny
  • Pubmed-ID: 15545454
  • title: Enterococcus saccharominimus sp. nov., from dairy products.
  • authors: Vancanneyt M, Zamfir M, Devriese LA, Lefebvre K, Engelbeen K, Vandemeulebroecke K, Amar M, De Vuyst L, Haesebrouck F, Swings J
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.63193-0
  • year: 2004
  • mesh: Anti-Bacterial Agents/pharmacology, Bacterial Proteins/analysis/isolation & purification, Bacterial Typing Techniques, Base Composition, Carbohydrate Metabolism, Carboxylic Acids/metabolism, DNA, Bacterial/chemistry/isolation & purification, DNA, Ribosomal/chemistry/isolation & purification, Dairy Products/*microbiology, Enterococcus/*classification/growth & development/*isolation & purification/metabolism, *Food Microbiology, Genes, rRNA, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, Proteome/analysis/isolation & purification, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, RNA, Transfer/genetics, Saline Solution, Hypertonic, Sequence Analysis, DNA, Sodium Azide/pharmacology
  • topic2: Enzymology

Reference

@idauthorstitledoi/urlID_cross_referencepubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
31277Barberan A, Caceres Velazquez H, Jones S, Fierer N.Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information10.1128/mSphere.00237-172759728776041
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/