Strain identifier
BacDive ID: 133799
Type strain: 
Species: Flavitalea gansuensis
Strain Designation: JCN-23
Strain history: <- L Zhang, Northewest A&F Univ., China
NCBI tax ID(s): 708199 (species)
version 8.1 (current version)
General
@ref: 30548
BacDive-ID: 133799
keywords: 16S sequence, Bacteria, aerobe, Gram-negative, motile, rod-shaped
description: Flavitalea gansuensis JCN-23 is an aerobe, Gram-negative, motile bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 708199
- Matching level: species
strain history
- @ref: 67771
- history: <- L Zhang, Northewest A&F Univ., China
doi: 10.13145/bacdive133799.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Chitinophagia
- order: Chitinophagales
- family: Chitinophagaceae
- genus: Flavitalea
- species: Flavitalea gansuensis
- full scientific name: Flavitalea gansuensis Zhang et al. 2013
@ref: 30548
domain: Bacteria
phylum: Bacteroidetes
class: Sphingobacteriia
order: Chitinophagales
family: Chitinophagaceae
genus: Flavitalea
species: Flavitalea gansuensis
strain designation: JCN-23
type strain: yes
Morphology
cell morphology
| @ref | gram stain | cell length | cell width | cell shape | motility | flagellum arrangement |
|---|---|---|---|---|---|---|
| 30548 | negative | 2.85 µm | 0.5 µm | rod-shaped | yes | gliding |
| 67771 | rod-shaped | yes | gliding | |||
| 67771 | negative |
pigmentation
- @ref: 30548
- production: yes
Culture and growth conditions
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 30548 | positive | growth | 15-37 | |
| 30548 | positive | optimum | 30 | mesophilic |
| 67771 | positive | growth | 30 | mesophilic |
culture pH
| @ref | ability | type | pH |
|---|---|---|---|
| 30548 | positive | growth | 06-08 |
| 30548 | positive | optimum | 7 |
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance |
|---|---|
| 30548 | aerobe |
| 67771 | aerobe |
halophily
- @ref: 30548
- salt: NaCl
- growth: positive
- tested relation: growth
- concentration: 0-1 %
observation
- @ref: 67771
- observation: quinones: MK-7
metabolite utilization
- @ref: 30548
- Chebi-ID: 4853
- metabolite: esculin
- utilization activity: +
- kind of utilization tested: hydrolysis
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 30548 | acid phosphatase | + | 3.1.3.2 |
| 30548 | alkaline phosphatase | + | 3.1.3.1 |
| 30548 | alpha-galactosidase | + | 3.2.1.22 |
| 30548 | catalase | + | 1.11.1.6 |
| 30548 | cytochrome oxidase | + | 1.9.3.1 |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 30548 | soil | ||||
| 67771 | From soil, dry wasteland | Gansu Province | China | CHN | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_63125.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_185;96_10019;97_30542;98_39082;99_63125&stattab=map
- Last taxonomy: Flavitalea gansuensis subclade
- 16S sequence: GU295962
- Sequence Identity:
- Total samples: 1139
- soil counts: 885
- aquatic counts: 82
- animal counts: 64
- plant counts: 108
Sequence information
16S sequences
- @ref: 30548
- description: Flavitalea gansuensis strain JCN-23 16S ribosomal RNA gene, partial sequence
- accession: GU295962
- length: 1445
- database: nuccore
- NCBI tax ID: 708199
GC content
- @ref: 30548
- GC-content: 47.1
External links
@ref: 30548
culture collection no.: ACCC 05418, KCTC 23071
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 22505601 | Flavitalea gansuensis sp. nov., isolated from soil from an arid area, and emended descriptions of the genus Flavitalea and Flavitalea populi. | Zhang L, Qin B, Jia Z, Wei G | Int J Syst Evol Microbiol | 10.1099/ijs.0.038455-0 | 2012 | Bacterial Typing Techniques, Bacteroidetes/*classification/genetics/isolation & purification, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/analysis, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Spermidine/analysis, Vitamin K 2/analogs & derivatives/analysis | Genetics |
| Phylogeny | 25288279 | Parasegetibacter terrae sp. nov., isolated from paddy soil and emended description of the genus Parasegetibacter. | Kim SJ, Ahn JH, Weon HY, Hong SB, Seok SJ, Kwon SW | Int J Syst Evol Microbiol | 10.1099/ijs.0.068692-0 | 2014 | Bacterial Typing Techniques, Bacteroidetes/*classification/genetics/isolation & purification, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Molecular Sequence Data, Phosphatidylethanolamines/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry | Genetics |
| Phylogeny | 26556818 | Flavitalea soli sp. nov. isolated from soil. | Kim SJ, Ahn JH, Weon HY, Hong SB, Seok SJ, Kim JS, Kwon SW | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000754 | 2015 | ||
| Phylogeny | 31760613 | Paraflavitalea soli gen. nov., sp. nov., isolated from greenhouse soil. | Heo J, Weon HY, Cho H, Hong SB, Kim JS, Kim SJ, Kwon SW | J Microbiol | 10.1007/s12275-020-9236-y | 2019 | Bacterial Typing Techniques/methods, Bacteroidetes/*classification/*isolation & purification, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, *Soil Microbiology | Enzymology |
Reference
| @id | authors | title | doi/url | ID_cross_reference | pubmed |
|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
| 30548 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 26879 | 28776041 |
| 67771 | Curators of the KCTC | https://kctc.kribb.re.kr/En/Kctc | |||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |