Strain identifier
BacDive ID: 133482
Type strain:
Species: Marinobacter lacisalsi
Strain Designation: FP2.5
NCBI tax ID(s): 475979 (species)
version 8.1 (current version)
General
@ref: 29154
BacDive-ID: 133482
keywords: 16S sequence, Bacteria, aerobe, Gram-negative, motile, rod-shaped
description: Marinobacter lacisalsi FP2.5 is an aerobe, Gram-negative, motile bacterium that was isolated from hypersaline environment.
NCBI tax id
- NCBI tax id: 475979
- Matching level: species
doi: 10.13145/bacdive133482.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Alteromonadaceae
- genus: Marinobacter
- species: Marinobacter lacisalsi
- full scientific name: Marinobacter lacisalsi Aguilera et al. 2009
@ref: 29154
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Alteromonadaceae
genus: Marinobacter
species: Marinobacter lacisalsi
strain designation: FP2.5
type strain: yes
Morphology
cell morphology
- @ref: 29154
- gram stain: negative
- cell length: 2.15 µm
- cell width: 0.75 µm
- cell shape: rod-shaped
- motility: yes
pigmentation
- @ref: 29154
- production: yes
Culture and growth conditions
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
29154 | positive | growth | 20-40 | |
29154 | positive | optimum | 32.5 | mesophilic |
culture pH
@ref | ability | type | pH | PH range |
---|---|---|---|---|
29154 | positive | growth | 05-09 | alkaliphile |
29154 | positive | optimum | 7 |
Physiology and metabolism
oxygen tolerance
- @ref: 29154
- oxygen tolerance: aerobe
spore formation
- @ref: 29154
- spore formation: no
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
29154 | NaCl | positive | growth | 03-15 % |
29154 | NaCl | positive | optimum | 7.5 % |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
29154 | 37054 | 3-hydroxybutyrate | + | carbon source |
29154 | 30089 | acetate | + | carbon source |
29154 | 16947 | citrate | + | carbon source |
29154 | 17234 | glucose | + | carbon source |
29154 | 24996 | lactate | + | carbon source |
29154 | 17306 | maltose | + | carbon source |
29154 | 17272 | propionate | + | carbon source |
29154 | 15361 | pyruvate | + | carbon source |
29154 | 30031 | succinate | + | carbon source |
29154 | 27082 | trehalose | + | carbon source |
29154 | 53426 | tween 80 | + | carbon source |
29154 | 17632 | nitrate | + | reduction |
enzymes
@ref | value | activity | ec |
---|---|---|---|
29154 | alkaline phosphatase | + | 3.1.3.1 |
29154 | catalase | + | 1.11.1.6 |
29154 | cytochrome oxidase | + | 1.9.3.1 |
Isolation, sampling and environmental information
isolation
- @ref: 29154
- sample type: hypersaline environment
isolation source categories
- Cat1: #Condition
- Cat2: #Saline
Sequence information
16S sequences
- @ref: 29154
- description: Marinobacter lacisalsi strain FP2.5 16S ribosomal RNA gene, partial sequence
- accession: EU047505
- length: 1537
- database: nuccore
- NCBI tax ID: 475979
GC content
- @ref: 29154
- GC-content: 58.6
External links
@ref: 29154
culture collection no.: CECT 7297, LMG 24237
straininfo link
- @ref: 91463
- straininfo: 309163
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 19542119 | Marinobacter lacisalsi sp. nov., a moderately halophilic bacterium isolated from the saline-wetland wildfowl reserve Fuente de Piedra in southern Spain. | Aguilera M, Jimenez-Pranteda ML, Kharroub K, Gonzalez-Paredes A, Durban JJ, Russell NJ, Ramos-Cormenzana A, Monteoliva-Sanchez M | Int J Syst Evol Microbiol | 10.1099/ijs.0.007518-0 | 2009 | Bacterial Typing Techniques, Base Composition, *Conservation of Natural Resources, DNA, Bacterial/analysis, Fatty Acids/analysis, Fresh Water/*microbiology, Genes, rRNA, Genotype, Marinobacter/*classification/genetics/isolation & purification/physiology, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Sodium Chloride, Spain, Species Specificity, *Wetlands | Genetics |
Phylogeny | 23117603 | Marinobacter nanhaiticus sp. nov., polycyclic aromatic hydrocarbon-degrading bacterium isolated from the sediment of the South China Sea. | Gao W, Cui Z, Li Q, Xu G, Jia X, Zheng L | Antonie Van Leeuwenhoek | 10.1007/s10482-012-9830-z | 2012 | Bacterial Typing Techniques, Base Composition, Benzoquinones/analysis, China, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Environmental Pollutants/metabolism, Fatty Acids/analysis, Geologic Sediments/*microbiology, Hydrogen-Ion Concentration, Marinobacter/*classification/genetics/*isolation & purification/physiology, Molecular Sequence Data, Phylogeny, Polycyclic Aromatic Hydrocarbons/*metabolism, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Temperature | Metabolism |
Phylogeny | 30231958 | Marinobacter bohaiensis sp. nov., a moderate halophile isolated from benthic sediment of the Bohai Sea. | Xu S, Wang D, Wei Y, Cui Q, Li W | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003025 | 2018 | Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Geologic Sediments/*microbiology, Marinobacter/*classification/genetics/isolation & purification, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistry | Transcriptome |
Reference
@id | authors | title | doi/url | ID_cross_reference | pubmed |
---|---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
29154 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 25578 | 28776041 |
91463 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID309163.1 |