Strain identifier
BacDive ID: 133469
Type strain: 
Species: Mesorhizobium australicum
NCBI tax ID(s): 754035 (strain), 536018 (species)
version 8.1 (current version)
General
@ref: 29081
BacDive-ID: 133469
keywords: 16S sequence, Bacteria, Gram-negative, rod-shaped
description: Mesorhizobium australicum LMG 24608 is a Gram-negative, rod-shaped bacterium that was isolated from plant associated.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 536018 | species |
| 754035 | strain |
doi: 10.13145/bacdive133469.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Phyllobacteriaceae
- genus: Mesorhizobium
- species: Mesorhizobium australicum
- full scientific name: Mesorhizobium australicum Nandasena et al. 2009
@ref: 29081
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Hyphomicrobiales
family: Phyllobacteriaceae
genus: Mesorhizobium
species: Mesorhizobium australicum
type strain: yes
Morphology
cell morphology
- @ref: 29081
- gram stain: negative
- cell shape: rod-shaped
Culture and growth conditions
culture pH
| @ref | ability | type | pH | PH range |
|---|---|---|---|---|
| 29081 | positive | growth | 5.5-9.0 | alkaliphile |
| 29081 | positive | optimum | 7.25 |
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 29081 | 22599 | arabinose | + | carbon source |
| 29081 | 17306 | maltose | + | carbon source |
| 29081 | 28053 | melibiose | + | carbon source |
| 29081 | 17992 | sucrose | + | carbon source |
| 29081 | 27082 | trehalose | + | carbon source |
Isolation, sampling and environmental information
isolation
- @ref: 29081
- sample type: plant associated
isolation source categories
- Cat1: #Host
- Cat2: #Plants
taxonmaps
- @ref: 69479
- File name: preview.99_809.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_220;97_239;98_643;99_809&stattab=map
- Last taxonomy: Mesorhizobium
- 16S sequence: AY601516
- Sequence Identity:
- Total samples: 30688
- soil counts: 18576
- aquatic counts: 5652
- animal counts: 4689
- plant counts: 1771
Sequence information
16S sequences
- @ref: 29081
- description: Mesorhizobium sp. WSM2073 16S ribosomal RNA gene, partial sequence
- accession: AY601516
- length: 1441
- database: nuccore
- NCBI tax ID: 754035
GC content
- @ref: 29081
- GC-content: 62.96
External links
@ref: 29081
culture collection no.: LMG 24608, HAMBI 3006, WSM 2073
straininfo link
- @ref: 91452
- straininfo: 364155
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 19605705 | Mesorhizobium australicum sp. nov. and Mesorhizobium opportunistum sp. nov., isolated from Biserrula pelecinus L. in Australia. | Nandasena KG, O'Hara GW, Tiwari RP, Willems A, Howieson JG | Int J Syst Evol Microbiol | 10.1099/ijs.0.005728-0 | 2009 | Alphaproteobacteria/*classification/genetics/*isolation & purification, Australia, Bacterial Proteins/genetics, Bacterial Typing Techniques, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fabaceae/*microbiology, Fatty Acids/analysis, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Genetics |
| Phylogeny | 23315406 | Mesorhizobium sangaii sp. nov., isolated from the root nodules of Astragalus luteolus and Astragalus ernestii. | Zhou S, Li Q, Jiang H, Lindstrom K, Zhang X | Int J Syst Evol Microbiol | 10.1099/ijs.0.044685-0 | 2013 | Astragalus Plant/*microbiology, Bacterial Typing Techniques, China, DNA, Bacterial/genetics, Fatty Acids/analysis, Genes, Bacterial, Mesorhizobium/*classification/genetics/isolation & purification, Molecular Sequence Data, Nitrogen Fixation, Nucleic Acid Hybridization, RNA, Ribosomal, 16S/genetics, Root Nodules, Plant/*microbiology, Sequence Analysis, DNA, Symbiosis | Genetics |
| Genetics | 24976896 | Complete genome sequence of Mesorhizobium australicum type strain (WSM2073(T)). | Reeve W, Nandasena K, Yates R, Tiwari R, O'Hara G, Ninawi M, Gu W, Goodwin L, Detter C, Tapia R, Han C, Copeland A, Liolios K, Chen A, Markowitz V, Pati A, Mavromatis K, Woyke T, Kyrpides N, Ivanova N, Howieson J | Stand Genomic Sci | 10.4056/sigs.4568282 | 2013 | ||
| Phylogeny | 32564274 | Mesorhizobium terrae sp. nov., a novel species isolated from soil in Jangsu, Korea. | Jung YJ, Kim HJ, Hur M | Antonie Van Leeuwenhoek | 10.1007/s10482-020-01435-0 | 2020 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, High-Throughput Nucleotide Sequencing, Mesorhizobium/*classification/isolation & purification/*physiology, Molecular Typing, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, *Soil Microbiology, Ubiquinone/analogs & derivatives/chemistry | Transcriptome |
| Phylogeny | 34870580 | Mesorhizobium comanense sp. nov., isolated from groundwater. | Pedron R, Luchi E, Albiac MA, Di Cagno R, Catorci D, Esposito A, Bianconi I, Losa D, Cristofolini M, Guella G, Jousson O | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005131 | 2021 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fresh Water/*microbiology, *Groundwater/microbiology, Italy, *Mesorhizobium/classification/isolation & purification, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Transcriptome |
Reference
| @id | authors | title | doi/url | ID_cross_reference | pubmed | journal |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 29081 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 25511 | 28776041 | |
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | 33211880 | Nucleic Acids Res. 49: D498-D508 2020 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |||
| 91452 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID364155.1 |