Strain identifier

BacDive ID: 133451

Type strain: Yes

Species: Maritalea mobilis

Strain Designation: E6

Strain history: Z.-P. Liu E6.

NCBI tax ID(s): 483324 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 9.3 (current version):
version 9.1:
version 9:
version 8.1:
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 9.3 (current version)

General

@ref: 29030

BacDive-ID: 133451

keywords: genome sequence, 16S sequence, Bacteria, aerobe, Gram-negative, motile, rod-shaped

description: Maritalea mobilis E6 is an aerobe, Gram-negative, motile bacterium that was isolated from seawater.

NCBI tax id

  • NCBI tax id: 483324
  • Matching level: species

strain history

  • @ref: 67770
  • history: Z.-P. Liu E6.

doi: 10.13145/bacdive133451.20250331.9.3

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Devosiaceae
  • genus: Maritalea
  • species: Maritalea mobilis
  • full scientific name: Maritalea mobilis (Xu et al. 2009) Fukui et al. 2012

  • synonyms

    • @ref: 20215
    • synonym: Zhangella mobilis

@ref: 29030

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Hyphomicrobiales

family: Hyphomicrobiaceae

genus: Maritalea

species: Maritalea mobilis

strain designation: E6

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotilityconfidence
29030negative1.8-3.3 µm0.4-0.7 µmrod-shapedyes
125438negative95.1
125439negative99.4

Culture and growth conditions

culture temp

@refgrowthtypetemperature
29030positivegrowth04-42
29030positiveoptimum36
67770positivegrowth30

culture pH

@refabilitytypepHPH range
29030positivegrowth07-10alkaliphile
29030positiveoptimum8.2

Physiology and metabolism

oxygen tolerance

@refoxygen toleranceconfidence
29030aerobe
125439obligate aerobe97.6

spore formation

@refspore formationconfidence
29030no
125438no91.69
125439no98.5

halophily

@refsaltgrowthtested relationconcentration
29030NaClpositivegrowth0.5-7.5 %
29030NaClpositiveoptimum2 %

observation

  • @ref: 67770
  • observation: quinones: Q-10

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2903017057cellobiose+carbon source
2903028757fructose+carbon source
2903028260galactose+carbon source
2903017234glucose+carbon source
2903017754glycerol+carbon source
2903028087glycogen+carbon source
2903017306maltose+carbon source
2903037684mannose+carbon source
29030506227N-acetylglucosamine+carbon source
2903017814salicin+carbon source
2903017992sucrose+carbon source
2903027082trehalose+carbon source
290304853esculin+hydrolysis
2903017632nitrate+reduction

metabolite production

  • @ref: 29030
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: yes

enzymes

@refvalueactivityec
29030alkaline phosphatase+3.1.3.1
29030catalase+1.11.1.6
29030cytochrome oxidase+1.9.3.1

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinent
29030seawater
67770Coastal seawater of TianjinChinaCHNAsia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Marine

taxonmaps

  • @ref: 69479
  • File name: preview.99_153568.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_3724;97_4576;98_101312;99_153568&stattab=map
  • Last taxonomy: Maritalea mobilis subclade
  • 16S sequence: EU255260
  • Sequence Identity:
  • Total samples: 381
  • soil counts: 6
  • aquatic counts: 341
  • animal counts: 33
  • plant counts: 1

Sequence information

16S sequences

  • @ref: 29030
  • description: Zhangella mobilis strain E6 16S ribosomal RNA gene, partial sequence
  • accession: EU255260
  • length: 1448
  • database: nuccore
  • NCBI tax ID: 483324

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Maritalea mobilis strain CGMCC 1.7002483324.5wgspatric483324
66792Maritalea mobilis CGMCC 1.70022617270922draftimg483324
67770Maritalea mobilis CGMCC 1.7002GCA_004363175scaffoldncbi483324

GC content

@refGC-contentmethod
2903053.1
6777053.1high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

@refmodeltraitdescriptionpredictionconfidencetraining_data
125438gram-positivegram-positivePositive reaction to Gram-stainingno95.1yes
125438anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)no96.868yes
125438spore-formingspore-formingAbility to form endo- or exosporesno91.69no
125438aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)yes84.342yes
125438thermophilethermophilicAbility to grow at temperatures above or equal to 45°Cno95.986yes
125438motile2+flagellatedAbility to perform flagellated movementyes64.98no
125439BacteriaNetspore_formationAbility to form endo- or exosporesno98.5
125439BacteriaNetmotilityAbility to perform movementyes75.1
125439BacteriaNetgram_stainReaction to gram-stainingnegative99.4
125439BacteriaNetoxygen_toleranceOxygenic conditions needed for growthobligate aerobe97.6

External links

@ref: 29030

culture collection no.: CGMCC 1.7002, JCM 15144

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny19620375Zhangella mobilis gen. nov., sp. nov., a new member of the family Hyphomicrobiaceae isolated from coastal seawater.Xu HY, Chen LP, Fu SZ, Fan HX, Zhou YG, Liu SJ, Liu ZPInt J Syst Evol Microbiol10.1099/ijs.0.004366-02009Bacterial Typing Techniques, Base Composition, Catalase/metabolism, China, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Flagella/physiology, Hyphomicrobiaceae/*classification/genetics/*isolation & purification/physiology, Locomotion, Molecular Sequence Data, Nitrates/metabolism, Oxidation-Reduction, Oxidoreductases/metabolism, Phylogeny, Pigments, Biological/biosynthesis, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Sodium Chloride/metabolism, Ubiquinone/analysisMetabolism
Phylogeny21317275Maritalea porphyrae sp. nov., isolated from a red alga (Porphyra yezoensis), and transfer of Zhangella mobilis to Maritalea mobilis comb. nov.Fukui Y, Abe M, Kobayashi M, Ishihara K, Oikawa H, Yano Y, Satomi MInt J Syst Evol Microbiol10.1099/ijs.0.028704-02011Aerobiosis, Bacterial Typing Techniques, Base Composition, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Hyphomicrobiaceae/*classification/genetics/*isolation & purification/physiology, Locomotion, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodophyta/*microbiology, Sequence Analysis, DNAGenetics

Reference

@idauthorstitledoi/urlID_cross_referencepubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
29030Barberan A, Caceres Velazquez H, Jones S, Fierer N.Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information10.1128/mSphere.00237-172546028776041
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
125438Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg OvermannPredicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets10.1101/2024.08.12.607695
125439Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardydeepG: Deep Learning for Genome Sequence Data. R package version 0.3.1https://github.com/GenomeNet/deepG