Strain identifier

BacDive ID: 133302

Type strain: Yes

Species: Marinomonas blandensis

NCBI tax ID(s): 374837 (species)

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General

@ref: 25051

BacDive-ID: 133302

keywords: 16S sequence, Bacteria, chemoorganotroph, pigmented

description: Marinomonas blandensis CECT 7076 is a chemoorganotroph bacterium that has a brown diffusible pigmentation and was isolated from Mediterranean Sea surface water.

NCBI tax id

  • NCBI tax id: 374837
  • Matching level: species

doi: 10.13145/bacdive133302.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Oceanospirillales
  • family: Oceanospirillaceae
  • genus: Marinomonas
  • species: Marinomonas blandensis
  • full scientific name: Marinomonas blandensis Arahal et al. 2016

@ref: 25051

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Oceanospirillales

family: Oceanospirillaceae

genus: Marinomonas

species: Marinomonas blandensis

type strain: yes

Morphology

colony morphology

  • @ref: 25051
  • colony color: vaguely coloured with greenish tinge semi-transparent

pigmentation

  • @ref: 25051
  • production: no
  • color: brown diffusible

Culture and growth conditions

culture medium

@refnamegrowthcomposition
25051Salt Tolerance Agarno1 % (w/v) tryptone, 0.3 % (w/v) yeast extract and 1.5 % (w/v) agar with the addition of Na+ or K+ chloride
25051Marine agar (MA)yesMarine Agar supplemented with NaCl between 2.5 and 7%(w/v) total salts

culture temp

@refgrowthtypetemperaturerange
25051positivegrowth15-28
25051nogrowth4psychrophilic
25051nogrowth37mesophilic
25051nogrowth40thermophilic

Physiology and metabolism

nutrition type

  • @ref: 25051
  • type: chemoorganotroph

halophily

@refsaltgrowthtested relationconcentrationhalophily level
25051Marine saltspositivegrowth12 %
25051Marine saltsnogrowth15 %
25051Marine saltspositiveminimum2.5 %(w/v)moderately halophilic

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
25051309162-oxoglutarate-carbon source
2505130089acetate-carbon source
2505158187alginate-hydrolysis
2505117968butyrate-growth
2505117968butyrate-carbon source
2505117057cellobiose-carbon source
2505116947citrate-carbon source
2505115824D-fructose-carbon source
2505112936D-galactose-carbon source
2505118024D-galacturonic acid-growth
2505130612D-glucarate-carbon source
2505118391D-gluconate-carbon source
2505117634D-glucose-carbon source
2505115748D-glucuronate-carbon source
2505116899D-mannitol-carbon source
2505116024D-mannose-carbon source
2505116988D-ribose-carbon source
2505117924D-sorbitol-carbon source
2505165327D-xylose-carbon source
25051370543-hydroxybutyrate-carbon source
250514853esculin-hydrolysis
2505129806fumarate-carbon source
2505116865gamma-aminobutyric acid-carbon source
2505117754glycerol-carbon source
2505115428glycine-carbon source
2505117268myo-inositol-carbon source
2505116977L-alanine-carbon source
2505130849L-arabinose-carbon source
2505116467L-arginine-carbon source
2505129991L-aspartate-carbon source
2505116349L-citrulline-carbon source
2505129985L-glutamate-carbon source
2505115971L-histidine-carbon source
2505115603L-leucine-growth
2505115603L-leucine-carbon source
2505118019L-lysine-carbon source
2505115729L-ornithine-carbon source
2505162345L-rhamnose-carbon source
2505117115L-serine-carbon source
2505116857L-threonine-carbon source
2505117895L-tyrosine-carbon source
2505124996lactate-carbon source
2505117716lactose-growth
2505117716lactose-carbon source
2505125115malate-carbon source
2505117306maltose-carbon source
2505128053melibiose-carbon source
25051506227N-acetylglucosamine-carbon source
2505117632nitrate-reduction
2505117272propionate-carbon source
2505117148putrescine-carbon source
2505115361pyruvate-carbon source
2505117814salicin-carbon source
2505115611sarcosine-carbon source
2505130031succinate-carbon source
2505117992sucrose-carbon source
2505115708trans-aconitate-carbon source
2505127082trehalose-carbon source
2505153426tween 80-hydrolysis
25051casein+hydrolysis
2505116991dna+hydrolysis
250515291gelatin+hydrolysis
2505128017starch+/-hydrolysis

metabolite production

  • @ref: 25051
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
25051acid phosphatase-3.1.3.2
25051alkaline phosphatase+3.1.3.1
25051alpha-fucosidase-3.2.1.51
25051alpha-galactosidase-3.2.1.22
25051alpha-glucosidase-3.2.1.20
25051alpha-mannosidase-3.2.1.24
25051beta-galactosidase-3.2.1.23
25051beta-glucosidase-3.2.1.21
25051beta-glucuronidase-3.2.1.31
25051chymotrypsin-3.4.4.5
25051cystine arylamidase-3.4.11.3
25051esterase (C 4)-
25051esterase Lipase (C 8)-
25051leucine arylamidase+3.4.11.1
25051lipase (C 14)-
25051N-acetyl-beta-glucosaminidase-3.2.1.52
25051naphthol-AS-BI-phosphohydrolase-
25051trypsin-3.4.21.4
25051valine arylamidase-

fatty acid profile

  • fatty acids

    @reffatty acidpercentage
    25051C10:0 3OH7.2
    25051C12:00.6
    25051C14:01
    25051C16:019.1
    25051C16:1ω7c / C16:1ω6c37.3
    25051C18:03
    25051C18:1ω7c30.7
  • type of FA analysis: whole cell analysis
  • incubation medium: Marine Agar (MA)
  • agar/liquid: agar
  • incubation temperature: 26
  • incubation time: 1
  • system: MIS MIDI
  • method/protocol: Sasser 1990

Isolation, sampling and environmental information

isolation

  • @ref: 25051
  • sample type: Mediterranean Sea surface water
  • geographic location: Blanes Bay Microbial Observatory in north-western Mediterranean Sea

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Marine
#Environmental#Aquatic#Surface water

taxonmaps

  • @ref: 69479
  • File name: preview.99_481.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_113;96_315;97_351;98_396;99_481&stattab=map
  • Last taxonomy: Marinomonas blandensis subclade
  • 16S sequence: DQ403809
  • Sequence Identity:
  • Total samples: 2985
  • soil counts: 24
  • aquatic counts: 2659
  • animal counts: 272
  • plant counts: 30

Sequence information

16S sequences

  • @ref: 25051
  • description: 16S rRNA gene and whole-genome sequences
  • accession: DQ403809
  • length: 1539
  • database: ena
  • NCBI tax ID: 374837

GC content

  • @ref: 25051
  • GC-content: 40.9
  • method: genome sequence analysis

External links

@ref: 25051

culture collection no.: CECT 7076, LMG 29722, MED 121

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny27902199Marinomonas blandensis sp. nov., a novel marine gammaproteobacterium.Arahal DR, Lucena T, Macian MC, Ruvira MA, Gonzalez JM, Lekumberri I, Pinhassi J, Pujalte MJInt J Syst Evol Microbiol10.1099/ijsem.0.0015542016Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Marinomonas/*classification/genetics/isolation & purification, Mediterranean Sea, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistryTranscriptome
Phylogeny31535968Marinomonas agarivorans sp. nov., an agar-degrading marine bacterium isolated from red algae.Yu WN, Du ZZ, Chang YQ, Mu DS, Du ZJInt J Syst Evol Microbiol10.1099/ijsem.0.0037232020Agar, Alteromonadaceae/classification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gracilaria/*microbiology, Marinomonas/*classification/isolation & purification, Oceans and Seas, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNATranscriptome

Reference

@idauthorstitledoi/urljournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
25051D. R. L. Arahal, T.,Macián, M. C.,Ruvira, M. A.,González, J. M.,Lekumberri, I.,Pinhassi, J.,Pujalte, M. J.Marinomonas blandensis sp. nov., a novel marine gammaproteobacterium10.1099/ijsem.0.001554IJSEM 66: 5544-5549 201627902199
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/